| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1384 |
|---|
| Symbol | |
|---|
| ID | 8087946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 1586922 |
|---|
| End bp | 1588190 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644835465 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002987008 |
|---|
| Protein GI | 242238827 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA ATAAGGCCTT CAATTCGCCA TTTTTATTAG CTGTCATTGG CATATATCTA
AGTTATTTCC TTCATGGTAT CAGCGTCATC ACCCTGGCGC AGAATATGAC GAGTCTGGCG
GCAAAATTCG GTACTGACAA TGCCGGAATT GCCTATCTCA TTTCAGGGAT TGGCCTGGGG
CGGCTAGTCA GTATTTTGTT CTTCGGCGTG ATTTCCGATA AGTTCGGCCG CCGCGTGTCG
ATTCTCATCG GCGTGGCGCT GTACGTCTTG TTCTTCTTCG GCATTCCTTC CAGCCCGAAC
CTGATCGTGG CCTTTATTCT CGCGGTCTGC GTCGGCGTCG CCAACGCCGC GTTGGACACC
GGGGCGTATC CGGCCTTGAT GGAAGCCTAT CCTAAAACGT CCGGCTCGGC GGTTATCCTG
CTTAAGGCGA TGATCTCTTT CGGACAGATG TTCTATCCGA TATTGGTCGG GTACTTGATC
TCCAGCAATA TCTGGTACGG CTACGGCATC ATTCTGCCGG GGATTGCGTT CCTGCTGGTG
TCGCTGTTGG TCGTCCGGAG CAAATTCCCG AGCCAGTTGG TGGATGCCAA CGCCATCAAA
GATTTGCCGC AGATGAATCA GAAACCGCTG GCCTGGCTGG AAGGGGTGGC GTCCATCGTG
TTCGGCGTGG CTATCTTCTC CACCTTTTAC GTGATCGTGG TCTGGATGCC GAAATATGCC
GCCGCCTATG CGGGGATGGC GGAAACCGAT GCATTGAAAA CCATCTCTTA TTACAGCATG
GGGTCGTTGG TCTGCGTATT CGTCTTCGCT CTGTTGCTGA AAAGCATGGT GCGCCCCGTC
TGGGCCAATG TGTTCAACTC TGCATTGGCG GTAGTGGCCA GCACGGTGAT TTATCTGTAT
CCGTCGGCGA CGGTGTGTAA TGTCGGCGCA TTTGTTATTG GTTTCTCTGC GGCTGGCGGG
TTGTTGCAAC TGGGCGTCTC CGTGATGTCC GAGTTTTTCC CGAAAAGCAA AGCCAAAGTG
ACCAGCCTGT ATATGTTGAT GGGCGGCCTG GCGAATTTCG TGATTCCGAT TATTACCGGC
TATTTGTCCA AGATTGAATT GAAATACATC ATTCTGCTGG ATATCGGTTT TGCTGCCGTC
TCGCTGCTCA CCGCATTTAT CGTTTTCGTT CGCTACTACA CAGTATTCAA TATTCCTGCG
AATGACGTTC GTCTGGGTGA AGGCATGTTT TCAGTGAAGA ATGCCAATAA CCGCCCGTCG
CATTCATAA
|
|---|
| Protein sequence | MSQNKAFNSP FLLAVIGIYL SYFLHGISVI TLAQNMTSLA AKFGTDNAGI AYLISGIGLG
RLVSILFFGV ISDKFGRRVS ILIGVALYVL FFFGIPSSPN LIVAFILAVC VGVANAALDT
GAYPALMEAY PKTSGSAVIL LKAMISFGQM FYPILVGYLI SSNIWYGYGI ILPGIAFLLV
SLLVVRSKFP SQLVDANAIK DLPQMNQKPL AWLEGVASIV FGVAIFSTFY VIVVWMPKYA
AAYAGMAETD ALKTISYYSM GSLVCVFVFA LLLKSMVRPV WANVFNSALA VVASTVIYLY
PSATVCNVGA FVIGFSAAGG LLQLGVSVMS EFFPKSKAKV TSLYMLMGGL ANFVIPIITG
YLSKIELKYI ILLDIGFAAV SLLTAFIVFV RYYTVFNIPA NDVRLGEGMF SVKNANNRPS
HS
|
|---|
| |