Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_4133 |
Symbol | |
ID | 8120985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 4662045 |
End bp | 4663325 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644854508 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003006408 |
Protein GI | 251791687 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGACCG TACGCAAAGG GCTGTGGCGT GTGGGCGGTG CGCTGTGCGT GCTGTTGCTG ATCACACCGG CACAGGCCGT CACTGAGGTG AACTTCTGGT ATTCCGGCGG CACTAAACCG CAAAAGATGA TGCTGACGCT GATCGACGAA TTTAACCGTA GTCAGGATCA ATACGTGGTG AAAAGCGCAT TACAGGGTAA TTACGATGAA ACCTGGCAAA AATTGCAGGC CGGCATGGCG GCGAAAAACG CCCCGGCGTT CGCGCTGTTG ACCGCCTTGC AGGGAACGGC GTTGGCGGAG CGCAAACTGT TGCGCGATAT GCGCCCTTAC ATGGATAGCC GCTTCCGTTT CACCGATTTT ATCGGTGCGT TCCGCCGTCA GGTTACCCGG CCGGACGGCA GCGTTTACGG CTTGCCTGCC TACGGCACAA CGCAGGTGCT TTACTACAAC CAGGCGGTGC TGGCGCAGCA CGGCTTTACG CCGGATGACC TGAAAACCTG GCAAGGACTG GCGAACGTGG CGGCGGCGGT CACCCGGAAA GACGCCGGCG GCAACACCCA GTATTACGGT TGGGAGCCGA TGTGGGGGCC GGGCAATCTG ATGGACGCCG CGTTGTCCAA CGGCGGGCGC ATCCTCAGCG AAGACGGCAA AAAAGTGCTG ATCGATTCGC CGGCATGGGT GGAGGTGTGG GACAGCTTCC GCCGCTGGAT TCATGAAGAC CGTATCATGC GTATCTACCA CGGCGGCCAG GGCTGGGAGT ACTGGTATAA AACCATCGAC GATGTGATGA AAGATCGGGC GTTCGGGTAT ACCGGCTCAT CCGGCGATCA GGGCGATCTT GATTTTCAGC GGCTGGCGGC GTTGCCTCAA CCGAGTTGGG GCAACAATCC GGCGGCACCG CAGGCGGGCG CGCTGGTATT TGTGATGCCG ACCGACACGC CGGACGCGGC GGCGAAGGGC GCTTTTGCGT TTATGCGTTT TTACACCAGC GCCGCCAATA CCGCCCGCTG GTCAATGTTC ACGGGTTATA TTCCGGTACG CGAAAGCGTA TTGCAGGACG CGGGCTACCA GAAATACGTC GCCGCCAACC CGCAGGCCGC CGTGCCGGTG CAGCAGGCGA AATCCGCCAG TATGGATTTT ATCGACCCGA CCAAAGGCAA AATTCTGGAC GCGCTGACCG TTGCCGCCGA TCAGGTGGAA ATCGAGAACA AACCGGCGCA GCAGGCATTG ACCGACGCGG CCCGTAAAGC GCAGAAAGCG CTGGATCGCA TCAATGAATA A
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Protein sequence | MMTVRKGLWR VGGALCVLLL ITPAQAVTEV NFWYSGGTKP QKMMLTLIDE FNRSQDQYVV KSALQGNYDE TWQKLQAGMA AKNAPAFALL TALQGTALAE RKLLRDMRPY MDSRFRFTDF IGAFRRQVTR PDGSVYGLPA YGTTQVLYYN QAVLAQHGFT PDDLKTWQGL ANVAAAVTRK DAGGNTQYYG WEPMWGPGNL MDAALSNGGR ILSEDGKKVL IDSPAWVEVW DSFRRWIHED RIMRIYHGGQ GWEYWYKTID DVMKDRAFGY TGSSGDQGDL DFQRLAALPQ PSWGNNPAAP QAGALVFVMP TDTPDAAAKG AFAFMRFYTS AANTARWSMF TGYIPVRESV LQDAGYQKYV AANPQAAVPV QQAKSASMDF IDPTKGKILD ALTVAADQVE IENKPAQQAL TDAARKAQKA LDRINE
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