| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3131 |
|---|
| Symbol | |
|---|
| ID | 8120996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3569344 |
|---|
| End bp | 3571107 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644853508 |
|---|
| Product | Pyoverdine biosynthesis protein |
|---|
| Protein accession | YP_003005432 |
|---|
| Protein GI | 251790711 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3207] Pyoverdine/dityrosine biosynthesis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGACA GTATTAAAGA GACGGCTAAT AAGATAGCTG ATATCGTAAA ATCCTATCTG
GTTCAGGCTC ACAACGATCG TTTTGAGCCG GAAGGGCGTG TGTTTCTGGA AAAACAAATC
GGTGCCTTCC TGCAAGCCGC CACGCCTGTC AGATTCGTCC TGCCTGGCTT CCCTTGCAAA
TCGCCCAATG TCGTCGACAA GTCGTTTGGC ACGTTACCGG ATTATGGCGA TGTGATTTCT
ATTAATCGTC TGGAGTCGTT GGCGAAAGCG ATTCAGTCTT TATATGAACC CGGCTGTCAG
GTGACTATTC TGAGCGATGG CACCACCTTT AATGATATTG TCGACGTTCC GGATGAAACG
AGTAAAGCTT ATAACCGCCA ATTACGCGAG TTAATTCAAT CGCCCTATAT TGAATGGAAA
GAACTCGGGG ATTTTTTCCC GGAAGCGCGT TCGGACGATG AAACCCGAAA AGCGTTGATT
AAATCAGCCG GATTACCTTA CAAAGGCATT GCCGATTTTA TCAAGCGAGT CAGAAATAAC
GCCGAACTGG CGGCGACGCA CGATAAGATT TGCAGTTATT TGTATAACGA TGTGCGACTG
AACCGGCAAC CCCAACAGTC GAATGAAGAT TACCTGAACA GTGTGGCGGA AAAAGCCTAT
CAGATGATGT ACCGCGGTCA GGCGTTAAGT GCGTTGGTTG AGCGGGCATT TCCCGATACC
GTACGCCTGT CGGTCCATCA GTATGATAAT GACGGCCCGA AATTTACCTT TGGTTTTACC
GATGGTCTCA CCATTGTGCG CCAACCGTGG CACAGCGTGC CGGTTCTGGC CGCGTCAGGA
AACGTTTCGC TGCAGGGGCA CGCCAGTATT GATAAAGACC GCCATGTGTT GGTGACTTAT
CAGGGGCGGC CGTGGGTGTA TGTGGAAGCC GATGACGCCG GTGCCGGAAA GTTCGACTAT
GAACTGCTGA AACAACCGTT GTTCGGCCTG AAGATTGACG ATCCGCACGG ATTAGGCGTT
AAGGCGCTGT CGCCGGCGTT TCTGGCTTTC CTGTCCGCTC AGTTTGGCTT CGTGTGTATC
AAGGGCGTGC AGTTTGAGCG CAGCGAGCAG TTGGAAGCGT TCTGCCAGCC GTTCGGCGAA
ATTTTCCAGT GGCAATTCGG TGCGGTGCAT GTGGTTAAAC CGGAGGATAA ACCGAGCGGA
TTCGTGCACT CGCTGGAAAA AACGCCGATA CATTGGGACC TGAGCATGAT TCGGCTGGAT
CACGAGCAGG TCGGCGGCAA TCCCTGGTTT ACCGCGGAGC GCTTTATGCT GTACTGCAAG
AATCCGCCGA AAAAAGGTGA AGGCAACACC ACGGTGGTGG ATGGTCGCAT CGTGATGGAG
ATGGTTGGCC CGGACGTGGT GAAAAAGTGG GAAGACGTCC ACATTACCTA TAACACGCCG
ATGACCTATT TCGGCGGCAA GCCCCGAACT TATCCGCTGG TGTATGCGCA CCCGAAAACC
GGTAAGAAGG CGTTCCGCTA TCAGGAGGGC AGCGACTCCG AGCTGCAAAA ATTCACGGTT
GAGGTGGAAG GCGTCTCCGC ACAGGAGAGC CGGGCTCTCA TCGAGGAACT TGACCGGCTG
GTATACGATG AACGTTGTAT GATTGCGCAT GACTGGGAGC AGGGCGATCT GCTGATCCTT
GATAACTGGC AGACGCTGCA CGGCCGGCTG CCGATGACCG AGGCCTCGCG TGGCCGCGAA
CTGTGGCGGG TGCAGGTGTT TTAA
|
|---|
| Protein sequence | MHDSIKETAN KIADIVKSYL VQAHNDRFEP EGRVFLEKQI GAFLQAATPV RFVLPGFPCK
SPNVVDKSFG TLPDYGDVIS INRLESLAKA IQSLYEPGCQ VTILSDGTTF NDIVDVPDET
SKAYNRQLRE LIQSPYIEWK ELGDFFPEAR SDDETRKALI KSAGLPYKGI ADFIKRVRNN
AELAATHDKI CSYLYNDVRL NRQPQQSNED YLNSVAEKAY QMMYRGQALS ALVERAFPDT
VRLSVHQYDN DGPKFTFGFT DGLTIVRQPW HSVPVLAASG NVSLQGHASI DKDRHVLVTY
QGRPWVYVEA DDAGAGKFDY ELLKQPLFGL KIDDPHGLGV KALSPAFLAF LSAQFGFVCI
KGVQFERSEQ LEAFCQPFGE IFQWQFGAVH VVKPEDKPSG FVHSLEKTPI HWDLSMIRLD
HEQVGGNPWF TAERFMLYCK NPPKKGEGNT TVVDGRIVME MVGPDVVKKW EDVHITYNTP
MTYFGGKPRT YPLVYAHPKT GKKAFRYQEG SDSELQKFTV EVEGVSAQES RALIEELDRL
VYDERCMIAH DWEQGDLLIL DNWQTLHGRL PMTEASRGRE LWRVQVF
|
|---|
| |