| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1818 |
|---|
| Symbol | |
|---|
| ID | 8377490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 2072516 |
|---|
| End bp | 2073337 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645001046 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_003158325 |
|---|
| Protein GI | 256829597 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0079129 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTTA TGACGAAGAT TGTTTTGGCC CTGCTGCTGG TCGCGTTTGC GGCCATGCCC
GTCATGGCCG CGGATCACGA ACTTGCCCAG AAATCCACCC TGAACGAAAT CCTGAAGCGC
GGCGAGCTGC GTGTCGGCCT CGACGCCGGC TACATGCCCT TCGAGATGAC GGACAAGAAG
GGCGAGATCG TCGGCTTCGA CGTGGACATG GCCAAGGAAA TGGCCAAGGC CATGGGCGTC
AAGCTGACCA TCGTCAACAC CGACTATGAC GGCATCATTC CCGCCTTGAT GGCCGACAAG
TTCGACATCA TCATCAGCGG CATGACCGTT AACCAGGAAC GCAACCTGCA GATCAATTTC
GCCGACCCGT ACATCGTCGT CGGCCAGGCC ATCCTCTTGA ACAAAAAGCA CGAGGGCGCG
ATCACTTCCT ATAAGGATTT GAACGATCCC AAGTTCACCG TTGTCTCCCG CATCGGCACC
ACCGGCGAAC AGGCCGCCAA GCGCATGATC CCCAAGGCTC AGTACAAGAG CTTTGAGAAG
GAGTCCGACG GCGCCATGGA AGTGGTCAAC GGCCAGGCCG ACGCGTTTGT CTATGACCTG
CCCTTCAACG TGGTCTTCAT GGCCCAGCAG GGCGGCAAGA ACCTGGTCCT GCTGGACAAG
CCCTTCACCT ACGAGCCCCT GGGCTTCGGC GTGAAGAAGG GTGACCCGGA CTTTTTGAAC
TGGCTGGACA ACTTCCTGAC CCAGATCAAG AACGACGGCC GCTTCGACCG CATCTACGAC
AAGTGGATCA AGGGCACCGA GTGGCTCAAG GACATCCAGT AA
|
|---|
| Protein sequence | MRFMTKIVLA LLLVAFAAMP VMAADHELAQ KSTLNEILKR GELRVGLDAG YMPFEMTDKK
GEIVGFDVDM AKEMAKAMGV KLTIVNTDYD GIIPALMADK FDIIISGMTV NQERNLQINF
ADPYIVVGQA ILLNKKHEGA ITSYKDLNDP KFTVVSRIGT TGEQAAKRMI PKAQYKSFEK
ESDGAMEVVN GQADAFVYDL PFNVVFMAQQ GGKNLVLLDK PFTYEPLGFG VKKGDPDFLN
WLDNFLTQIK NDGRFDRIYD KWIKGTEWLK DIQ
|
|---|
| |