Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1341 |
Symbol | |
ID | 8377006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 1508618 |
End bp | 1510456 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645000569 |
Product | putative phytochrome sensor protein |
Protein accession | YP_003157855 |
Protein GI | 256829127 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGCA ACACTACCAT ACAAGACTCC GCACCGACCG GCGCAGGCCC CGTCCTGTCA TGGGCCGAGT TCTCGTCGGC CTCGAGCACC CGGGAGTATT GCCAGGGGTG GATCGGGCTG CAGAGCGGCC TGATTCCAGG CGTGATCCAG GGAATTCTGG TCACCGAGGG GGAGGACGGG CAGTTCACCC CCGCTGCGGT GTGGCCGCAC GGCGGCGCGG ACCCGGTCCG GCTGGCCGAG GCTCTGGAGC GGGTCATCGA TGACGAGCGA GGCTTGGTGC TGGAACTGGA TACTGCTGAC CGGTATGCCA TGGTCTACCC CGTCCGGGTG GACGATAGGC TGTTCGCCGT GGTGGCCATG GAACTGGCGG CGGACAGCGA GGCCGATCTG AACCGGGCCA TGGAGCAGTT GCAGTGGGGC TGCTCGTGGC TGGAGCTGCT CCTGCGCCGC CGGGAGGCCG ACGAGGACAA GGCTCGTCTG CTGCGGCTCG GGACGGCGGT GGACATGCTG GCCCTGACCC TGGACCGGCC ATCCTGCCGC GAGGCGGCCA TGACCTTCGT CACGGAGCTT TCGGCCGCCG CCCAATGCGA GCGGGTCAGC CTCGGTTTCG TGCGCGGGCG GTCCGTTGTC CTCGAAGCGG TCTCGCACAG CGCCGAGGTC GACCTGAAGA TGAACCTGAC CCGGAACATC GAACGGGTCA TGGACGAAGC CCTGCTGCAG CGTCGCGAGA TCTCCTGGCC CACGGACGAC GCCACGGTAA TTTGCCGCGA GCACGAGGCC CTCTCGCGCC AACAGGCCAT GGCTGCGGTC CTGACCCTGC CCCTGTACGG ACAGGACCGC TACTATGGCG CCCTGACCGT CGAGCGCGCC GCGGACCAGC CCTTCACGGA GCGCGACGCG GAATTCTTCC GGGCCGTGGC GGCGCTGGCC GGTCCCATTC TGGAGGCCAA ACGCCAGTCC GACCGCTCCG TTCTCGACCA CGTCCGCGCC AGTCTGTCCG AGGCGGCCGG GCGGCTGCTT GGCCCCCGGC ACTACGGCCG CAAGCTTGCC GTGGCGGCGC TGGCCTGCGT GGCCCTGTTT CTTTTCTTTG CCCACGGGGA TTACCGCCTG CGCGCGGACA TCGCCCTGGA AGGGGGTATC CGCCGAGCCG TGACCGTACC CTTCGACGGC TTCATCCAGC AGGCCCCGTT CCGGGCCGGC GATCTGGTGA ACGAAGGAGA CGAGCTCTGC CTCCTCGACG ACCGGGACCT GCGCCTGGAC AGAATGGTCA CCGCCAGCCG TCTGCGGCAG CTGGAGCAGC AGCTTCAGGA GGCCGTGTCC CAGCACGACC GGGCCCAGTC CAGCATCATC CGCGCGCAGC TGAATCAGGT TCAGGCCGAG CTGGATCTGG CCGACGCGCA ACTGGCCCGC ACCTGCCTCA CGGCGCCGTT CCCCGGCCTC ATCGTCAGCG GGGACCTGAG CCAGCGCCTC GGCAGCGCCG TGAAGCAGGG TGACGTGCTC TTCGAGGTCA CGCCGCTGGA CTCCTACCGG GTCATTCTCA AGGTCGACGA ACGGCGCATC GCCGACGTTC GGGTCGGACA GCGTGGCGAG TTGGTCCTTT TCTCCCTGCC CGGCCAAGAG TTCGGGTTCA CTGTCAGCAA GATCACACCC ATCGCGAGGG CTGAGGAAGG CAGCAATCAT TTCCGGGTGG AGGCGTCGCT GGACAGCGTG GACCAAACCC TGCGCCCCGG CATGGAAGGG GTGGGAAAGG TTGCCGTGGA CCGGCGTAAA CTGGTTCACA TCTGGATCCG GGACATGCGC GAATGGCTGA CCCTCTTCTT CTGGAAATGG CTGCCTTGA
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Protein sequence | MSSNTTIQDS APTGAGPVLS WAEFSSASST REYCQGWIGL QSGLIPGVIQ GILVTEGEDG QFTPAAVWPH GGADPVRLAE ALERVIDDER GLVLELDTAD RYAMVYPVRV DDRLFAVVAM ELAADSEADL NRAMEQLQWG CSWLELLLRR READEDKARL LRLGTAVDML ALTLDRPSCR EAAMTFVTEL SAAAQCERVS LGFVRGRSVV LEAVSHSAEV DLKMNLTRNI ERVMDEALLQ RREISWPTDD ATVICREHEA LSRQQAMAAV LTLPLYGQDR YYGALTVERA ADQPFTERDA EFFRAVAALA GPILEAKRQS DRSVLDHVRA SLSEAAGRLL GPRHYGRKLA VAALACVALF LFFAHGDYRL RADIALEGGI RRAVTVPFDG FIQQAPFRAG DLVNEGDELC LLDDRDLRLD RMVTASRLRQ LEQQLQEAVS QHDRAQSSII RAQLNQVQAE LDLADAQLAR TCLTAPFPGL IVSGDLSQRL GSAVKQGDVL FEVTPLDSYR VILKVDERRI ADVRVGQRGE LVLFSLPGQE FGFTVSKITP IARAEEGSNH FRVEASLDSV DQTLRPGMEG VGKVAVDRRK LVHIWIRDMR EWLTLFFWKW LP
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