| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1899 |
|---|
| Symbol | |
|---|
| ID | 6026407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 2001870 |
|---|
| End bp | 2002922 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641594717 |
|---|
| Product | permease |
|---|
| Protein accession | YP_001718024 |
|---|
| Protein GI | 169832042 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAATACC TGTGCAGCGG TTACCGGGAG CTGATGGAAT ATCTCACGTT GCACACCCTT
ACCTGCCTGG TGCCGGCGTT CTTCATCGCC GGCGGGATCG CGGTCGCCGT CTCCTCGGCG
GCGGTGCTGA AATACTTCGG CCCCACAGCT AACAAGTACG TCTCTTACGG GGTGGCCTCG
GTGTCCGGAA CGGTGCTGGC CGTTTGCTCC TGCACCATCC TGCCGCTCTT TGCCGGGATC
TACCGCAAAG GGTCGGGGCT GGGTCCGGCG ATCACCTTTC TTTACGCCGG TCCGGCCATC
AACCTGCTGG CGATCGTGTT TACGGCCCGG CTCCTGGGTT TTGACCTGGG CGCCGGCCGG
GCCGTCGGGG CGGTGGTGTT CGCAGTGGTG ATCGGCCTGG CGATGTCCGT GCTGTACCGC
CGGGAAGAGG CGGCCAAGGC CGGGGCGGCG GCCGCCGCCG GACAGGGTTT TAATCCCGCG
GCGGGGACCG GCGCCGGGAA GCCCCCGGCC CAAACCCTGG CTTTCTTCCT GATCCTCGTG
GCCGTCTTGC TGGCCGGCAG CTGGGGCCTG CCCCACCTGA CCTACCTGGC GGTGCTGGGG
GGTCTGCTCG CCGCCCTGGG CCTGGTCCTG GCGGTCTGGT TCACCAGGGA GGAAGTGGTG
GAATGGCTGC GGGAAACCTT CACCCTGGGT CGGCTGATCG TGCCGGTTCT GCTGGTCGGC
GTTTTTCTCG CCGGGGCGCT GAAGGCGGTC GTTCCGGACG CCTGGGTGGC GGCGGCCGTA
GGCGGCAACA GCCTGCAGGC CAACTTGCTG GCCTCGGTGG TCGGGGCGCT GATGTACTTC
TCCACCCTGA CCGAGGTGCC GCTTGTAAAA GCGCTCCTGG ACATGGGGAT GGGAAAGGGG
CCGGCGCTGG CCCTGCTGCT GGCAGGCCCG GCGCTGAGCC TGCCGAACAT GCTGGTGATC
CGGAACATCC TGGGCACCAA AAAGGCGCTG ACCTATATCG GGCTGGTGGT GGTGGCGGCC
ACCACGACCG GCATGGTCTT CGGCCGCTTC TAG
|
|---|
| Protein sequence | MEYLCSGYRE LMEYLTLHTL TCLVPAFFIA GGIAVAVSSA AVLKYFGPTA NKYVSYGVAS
VSGTVLAVCS CTILPLFAGI YRKGSGLGPA ITFLYAGPAI NLLAIVFTAR LLGFDLGAGR
AVGAVVFAVV IGLAMSVLYR REEAAKAGAA AAAGQGFNPA AGTGAGKPPA QTLAFFLILV
AVLLAGSWGL PHLTYLAVLG GLLAALGLVL AVWFTREEVV EWLRETFTLG RLIVPVLLVG
VFLAGALKAV VPDAWVAAAV GGNSLQANLL ASVVGALMYF STLTEVPLVK ALLDMGMGKG
PALALLLAGP ALSLPNMLVI RNILGTKKAL TYIGLVVVAA TTTGMVFGRF
|
|---|
| |