Gene Daud_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0554 
Symbol 
ID6026898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp592996 
End bp594693 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content68% 
IMG OID641593390 
ProductDNA mismatch repair protein MutL 
Protein accessionYP_001716727 
Protein GI169830745 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGAA TCAGGGTTCT GGATGCCGAC ACCGTCTCCC GGATCGCGGC GGGCGAAGTA 
GTAGAGCGGC CGGCGGCCGT GGTCAAGGAG TTGGTGGAAA ATGCACTGGA TGCTGGAGCC
CGGGTGGTGC ACATCGACAT AGCCGCCGGT GGTCTGGAAA GGATCACGGT TACAGACGAC
GGGTGCGGAA TGGAACCGGG CGACGCCGAA CTGGCCCTCC AGCGGCACGC GACCAGCAAG
ATCACTGCGG CGGAAGACCT GGAGGCGGTC CGGACGCTTG GTTTCCGGGG AGAAGCTCTG
CCCAGCATCG CGGCCGTTTC CCGCCTGACG CTCCGCACCC GGCCGGCGGC GTCGTCCGCC
GGGACCGTGC TCGAAACTGA GGGCGGGCTG GTGCTTTCGG CGGGCGTGTC CGGTGGCCCC
CCGGGAACGG TGGTGACGGT CCGCGACCTT TTCTTCAATA CGCCGGCACG CAAGAAGTTT
GTCCGGAGCG CCGCCCACGA GGGGGCGATG ATCTCGGAGA TGGTGGGCCG CCTGGCCCTG
TCGCGGCCCG AGGTTGCTTT CCGCCTGACC GTCAACGGCC GCCAGGTGCT GGCGACGTCC
GGGTCGGGTG ACCTCCTGGA TGCGATCGGT GCGGTGTTCG GGGCCGCGGT GGCCCGGGAA
ATGGTCCCGG TGCGGTTTGA GGAACGCGGG CTTGGGGTAT CGGGTTACGT GGGCCGGCCC
GGAGTGTCCC GGAGCAGCAG GCGGCACCAG GTGTTTTTCG TGAACGGCCG GTACATCCGC
AGCGCGTATC TGGGGGCGGC GGCCGAGGAG TCACTGCATG GCGCGATGCC GGCAGGAAGG
CACGCGGTAC TGGTGCTGCA TCTGTCGGTC GAGCCCGGAA TGGTGGACGT CAACGTGCAC
CCGGCGAAGC ACGAAGTCCG CTTCAGCCAG CCCCGGGACG TGTATGTCGT GGTGCACCGG
GCCGTACGTG AGGCCCTGCA CCGGGAGATA CAAATCCCGG TGGAAGAGTG CGGACACCTG
GAATCTGCCT GTTTTCCCGG TGCGGGCACC GGGTTCCGGA TACCGGTGCA GGTGACCTTC
CAAGGCGGGG AGCCGGAACT GCGCGAAGAA AGCACCGGTT ACCAGGGCTT TCCGCAACTG
CAGCCCCTGG GCTTTCTGCC GCCGGCCTAC ATCCTGGCCG GGGGGGCGGA CGGGCTCTAC
ATCCTGGACC AGCACGCGGC GCACGAGCGG GTCCTGTTCG AGCAGTACCT TCGTACGTTG
GAGCAGTCCG CCGGGAAGCA GCTTCTGGTC CCGGTCATGG TGGAGATACG GGGGCGGGAG
GCGCAAACCC TCGAGGATTA CGGCCCTTTC CTGCGGCAGG CCGGTTTTGA GGTCGATCCG
TTCGGAGAAG GCGCCTATCT GATCCGGACG GTGCCTTCCT TCCTGCGGCC GGGTGCGGAG
GCCGTCTTGT TGACCGACGT TTTGGACCGG CTGGCCGGGG AACGGCCGGT GGACGCGGAC
GCTTTCCGCC GGGTGGTGGC GGCGGTTCTG GCCTGCCACC GGGCGGTCCG CGGCGGGGAC
AAGCCAGCCG GCCCGGAGGC GGCCGCGCTT TTGACGGACC TCGGCCGTTG CGCGGAGCCA
TACTTGTGCC CGCACGGCCG TCCAACTCTG ATCAGGATCG GTTTTCCGGA ACTGGCGCGG
AGGTTTCAGC GCGAATGA
 
Protein sequence
MARIRVLDAD TVSRIAAGEV VERPAAVVKE LVENALDAGA RVVHIDIAAG GLERITVTDD 
GCGMEPGDAE LALQRHATSK ITAAEDLEAV RTLGFRGEAL PSIAAVSRLT LRTRPAASSA
GTVLETEGGL VLSAGVSGGP PGTVVTVRDL FFNTPARKKF VRSAAHEGAM ISEMVGRLAL
SRPEVAFRLT VNGRQVLATS GSGDLLDAIG AVFGAAVARE MVPVRFEERG LGVSGYVGRP
GVSRSSRRHQ VFFVNGRYIR SAYLGAAAEE SLHGAMPAGR HAVLVLHLSV EPGMVDVNVH
PAKHEVRFSQ PRDVYVVVHR AVREALHREI QIPVEECGHL ESACFPGAGT GFRIPVQVTF
QGGEPELREE STGYQGFPQL QPLGFLPPAY ILAGGADGLY ILDQHAAHER VLFEQYLRTL
EQSAGKQLLV PVMVEIRGRE AQTLEDYGPF LRQAGFEVDP FGEGAYLIRT VPSFLRPGAE
AVLLTDVLDR LAGERPVDAD AFRRVVAAVL ACHRAVRGGD KPAGPEAAAL LTDLGRCAEP
YLCPHGRPTL IRIGFPELAR RFQRE