Gene Daud_0110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0110 
Symbol 
ID6027314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp117535 
End bp120531 
Gene Length2997 bp 
Protein Length998 aa 
Translation table11 
GC content62% 
IMG OID641592963 
Productmolybdopterin oxidoreductase 
Protein accessionYP_001716310 
Protein GI169830328 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)
[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGG AGGCGGTTGA ATTCACCATT AACGGCCTGC CCGTCAGGGT CCCCGGAAAA 
GGGGCGACCA TACTGGAAGC AGCTTTAAGA AACGGCATAT ATATTCCGCA TCTCTGCCAC
CACCCCGACT TAAAACCGGC CGGCTTGTGC CGGGTGTGCA TGGTCGAGGC CGACGGAAAA
ATGGTGGCTG CCTGCCGCAC GCCGGTCGCC GACGGGATGA AGGTCGCAAC CGGGAGCCCG
AACCTGGACC AGTACCGCCG GTACATAGTG GGGGTCATCC TGGCCGAACA CGAGTCGGAC
TGCCTTACCT GCGGGAAGAA CCTGAACTGC AAACTTCAGG AGGTAGCCCG CTACGCAAAC
CTTGAACCCA CCAAGTTCAA GGAGCTAAGG CCGGTCAAGC CGGGGAAGCC CCTGGACGAC
ACGCACCCGT GGATCGTAAG AAACCACAAC AAGTGCATTT TATGCGGTAT CTGCGTACGG
ACGTGCCGCG AGATCGCTCA GGTGAACGCC ATCGACTTTG CCTTCCGGGG CCGCGCTACC
ACCATCAGCA CCTTCGGAAA CAAGCCCCTG CACGAGTCAA ACTGCGTCTC CTGCGGCGAG
TGCGTGGCCC GCTGTCCAGT GGGAGCCCTT TTGCCTAAAG TGTCGGCCGA GCCGGCCCGG
GAGGCCGCCC TCATCCCACC CCAGGTGGTC CGGGAGTGTG AGCGCCGCCC GGAAACGCCC
CCTTCCCTTT TCATGCTGAA AGAAAAGGGA GCAGTTGCAG AGAAGATCAC CCTTACCATT
GACGGCCTGG AGGCAAGCGT GGAAAAAGGG GCCACCGTTT TGGAGGCCGC GCAAAAGGCG
GGCATCTATA TTCCCTTCCT GTGCTTTCAC CCCGAACTCA CGGGTTCCGG CGGATGCCGG
GTCTGCGCGG TGGAAATTGA CGGCAAGGTT GTGCCTTCGT GCACTACCCG GGCCAGGGAA
GGGATGGTCG TGCGGACCAG TTCTCCGCAG GCCCGGGAAG CGCAGGCGGC GGCGGTGAAA
AGAATCCTGG CCGGCCATAA CGGGGACTGC CTGAACTGCG CGAAAAACGG CCGGTGCAAA
CTGCAGGAGG TAGTCGGCTA CACCGGGGTT TACCAGGAAA TGGCGGGCAC CCCCGCCCCC
TTTGCGGAAG TGGACGAGAG CAATCCGTAC TTTGTTCTCG ACCGTTCCCG CTGCGTCGCC
TGCGGCATCT GCCTCCGCAC GTGCCGGCAG GTCAACGGCG CGGACGCGCT GGAATTCAAA
CGCGTGGACA ACCACCGGGT GGTGGTCCCC CGGCAGGGAG GCAGTCTGGC CGAGTCAGCC
TGCGAGTCCT GCGGCGAATG CGTGGCCCGC TGCCCGGTGG GGGCCCTTTT GCCCAAGGAG
CTGCAGCAGC CCGGCCGGGA GGTGGAAACA GTGTGCACCG AGTGCGGGAT CGGCTGCGGC
GTATATTTCG GCGCCAGAGG CGGCAGGCTG GTCAGCGCCC GCCAAAACCT CAGCCACAAA
ACGAGCAAAG GGCGCCTCTG CGGGAAAGGC CGGTTCGGCT GGGGTGTGCT CAATCACCCC
GACCGTCTGA AAACCCCCTT AATCAAAAAA GACGGCCAGT TCGTTGAAGC CGGCTGGGAA
GAAGCACTCG GCCTGGCGGC CGGCGGGTTT TCCCGGTACA AAGGGGGAGG GGCTGTGGTT
CTATACAGCC CCCGGGTCAC CAACGAAGAA ATCTACCTGG CCTTGAAGTT TGCCCGGGCG
GTGCTGGGAA CGAGCAACAT TGCCGACGCC GAGTCGTTTG CGAGCCGCGC CGGTTTATTG
GACGGTCTGG GCACAACCGT GGGCAGCAAC GCCATGACCA TTCCGGTCAG GCAAATTGAA
AGGGCGGCCG GTCATTTTGT GATTAGTTCC AGTCCCACTG AATCTCATCC GATCATCGGA
TTTGAAATTC GCAAATCGGT TAACAAGGGG GCGAAACTGA TCATTGCCGA CTCCCGGGAA
ATACCCCTGT CCCGGTTGCC CCACATTCGC CTTGCGCTTC GCCCGAGCAC GGAGCTTGCT
CTGCTGCTGG GTATGGCCAG GGCTATTCTG GACGAAAAGC TCCACGACGA AGGGTTTATC
CGGGAGAGGA CCACTAATTT TGACGCTTTC CAAAAATCCC TGGCCGATTT CACCGTAGAG
AAAGCAGCGG AAATCACCGG TGTTCCCGGC GCGCAGATCC GGGAAGCGGC GCGGGTGTAC
GCCACCAGCA AACCGGCCCT CCTCTTCTGG TCCGAAGAAA TCGCGCAACA CCCAACGGGC
CAGGACAGCG TCCGGGTGCT GGCCCAGCTG GCTTTAATGA CCGGCAACTA CGGCAAGCCG
GGCGCGGGTT TCGTGCCTCT GATCGGCCGG AGCAACTTCC AGGGCGCTCT TGATCTGGAC
GTTACCCATC CCTGGTCTTT GGTCAGCAAA GAAAAAGTTG CCGATGCGTG GGGGTGCGCC
GTCCCCGAAC CCGCCGGGTC GGCAGAGAAC AAAGCGAAGG CCTGGTACAT TATCGGTGCC
GACCCGGTGA CCAAAGCGGC AGATGCGGAT AGCGTGCGCA AGGCCCTTTC AGAAGCCCCC
TTCGTGGTGG TCCAGGACAC GTTCCTCACC GAAACGGCAA AGCTGGCGCA GGTGGTGCTC
CCCACGGCCG GTTTTGCGGA AAAGGAGGGG ACCTTCACGG CGGTGGACCG CCTCGTTCAG
CGTGTCCGCC AGGTAGCGGA ACCGCCCGGG GCAGCCAAGC CAGACTGGTG GATTATCTGC
GAAATTGCCC ACCGCATGGA AGCCGAAGGA TTCGCCTACA ACCATCCCTC CCAAATCATG
GAGGAAATAT CGTCCAACTA CCCGGCCTAT GCAGGGATCA GCTACGACCG GCTCGACCCG
GAGGGGTTGC GCTGGCCTTG CCCCGACAAA GAACACCCGG GGACGGACGT GCTGCACGAA
AGCGAATTTT TTGGCCTGGG CAAGGCTCAA TTCCGGCCTC TGCAATACAA GCCGTAA
 
Protein sequence
MEMEAVEFTI NGLPVRVPGK GATILEAALR NGIYIPHLCH HPDLKPAGLC RVCMVEADGK 
MVAACRTPVA DGMKVATGSP NLDQYRRYIV GVILAEHESD CLTCGKNLNC KLQEVARYAN
LEPTKFKELR PVKPGKPLDD THPWIVRNHN KCILCGICVR TCREIAQVNA IDFAFRGRAT
TISTFGNKPL HESNCVSCGE CVARCPVGAL LPKVSAEPAR EAALIPPQVV RECERRPETP
PSLFMLKEKG AVAEKITLTI DGLEASVEKG ATVLEAAQKA GIYIPFLCFH PELTGSGGCR
VCAVEIDGKV VPSCTTRARE GMVVRTSSPQ AREAQAAAVK RILAGHNGDC LNCAKNGRCK
LQEVVGYTGV YQEMAGTPAP FAEVDESNPY FVLDRSRCVA CGICLRTCRQ VNGADALEFK
RVDNHRVVVP RQGGSLAESA CESCGECVAR CPVGALLPKE LQQPGREVET VCTECGIGCG
VYFGARGGRL VSARQNLSHK TSKGRLCGKG RFGWGVLNHP DRLKTPLIKK DGQFVEAGWE
EALGLAAGGF SRYKGGGAVV LYSPRVTNEE IYLALKFARA VLGTSNIADA ESFASRAGLL
DGLGTTVGSN AMTIPVRQIE RAAGHFVISS SPTESHPIIG FEIRKSVNKG AKLIIADSRE
IPLSRLPHIR LALRPSTELA LLLGMARAIL DEKLHDEGFI RERTTNFDAF QKSLADFTVE
KAAEITGVPG AQIREAARVY ATSKPALLFW SEEIAQHPTG QDSVRVLAQL ALMTGNYGKP
GAGFVPLIGR SNFQGALDLD VTHPWSLVSK EKVADAWGCA VPEPAGSAEN KAKAWYIIGA
DPVTKAADAD SVRKALSEAP FVVVQDTFLT ETAKLAQVVL PTAGFAEKEG TFTAVDRLVQ
RVRQVAEPPG AAKPDWWIIC EIAHRMEAEG FAYNHPSQIM EEISSNYPAY AGISYDRLDP
EGLRWPCPDK EHPGTDVLHE SEFFGLGKAQ FRPLQYKP