Gene Daro_4055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4055 
Symbol 
ID3566896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4354032 
End bp4354439 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content57% 
IMG OID637682527 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_287251 
Protein GI71909664 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAGC GCCGTCTAAA AAGCGAAATC AACGTCGTGC CTTATATCGA TGTCATGCTG 
GTGCTGCTCG TCATCTTCAT GGTGGCGACG CCGATGATGA CGACCGGTTC GGTCGATCTG
CCGGCTTCTG GTACGGCGCC GCAGAAACCG GATAAATACA TCAAGGTGCA GATCAAGGAT
GATGGCAGCC TGTCGCTGTT CAATATCAAG GGCGACGAGT CCAAGCTGAA GGGCATCAAG
GAACTGAAGG CCGAACTCGC CACCTTGAAG GCGGCTGACG ACCAGACGCC AATCCTGATC
GCCGGCGCCA AGGAAACGCA GTACAAGAAC GTCATCGAAG TGCTCGACGA AGCCAAGCGC
GCCGGGTTCC AAAGAGTTGG CCTGGAAACC GCCAGCGCCA GCAAGTAA
 
Protein sequence
MRQRRLKSEI NVVPYIDVML VLLVIFMVAT PMMTTGSVDL PASGTAPQKP DKYIKVQIKD 
DGSLSLFNIK GDESKLKGIK ELKAELATLK AADDQTPILI AGAKETQYKN VIEVLDEAKR
AGFQRVGLET ASASK