Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3052 |
Symbol | |
ID | 3566227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 3296565 |
End bp | 3298136 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637681523 |
Product | GGDEF |
Protein accession | YP_286252 |
Protein GI | 71908665 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 0.927179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0159246 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCAC TTCGCTACCG CCCCACCCTG CTTGCGCTGA TGAGCGCCTG GCTGGGAGTC ATTGCATTCG CAACCCACCT CCTGCTCTCG GCCGAAATCG GGCGCTGGGA GCGTAATTTC GATTCGGAAA TTCTGCGCCT GAGCAGCGAA GTCAAAAACA AGCTGGACAT GAATGAAGCC GTCCTGTCGG GCTTTGCTGC CTTTCTGCAA GCGGTCGAAC GCAACGACAT GGCCTCGGCC ACCCGGTATG CGGCTTCAGC AATGGCCTCC TACCCGCACA TCTACATGCT GGAGGTGGCG CGCCAGGTCC CACTCGCCGA GCAAGCTGAA TTCCAGTCCA CCTTGCGCCG GGAATGGCTG CCCAGTTTTA CGCTGAAGGA TTTTCCGACA ATCACCCAGC GGCCCTCCCA AAAGCTGCGC ATGCAGAACT ACACCTGGCC AATCCTGTTC ATGTACCCAC CCTTACCTGA AGCAGAGGAG ATTTTTGGTG TGCGACTGGA AACGGTCGAC TACCTTGGCC ATTCCTTGGC GCTGGCCCAC AAAAGTTCAC GACCGGTCGC TTCTCCGATT TTCAAGATGT TCGAGGGAGG AAGCGCCTAC ATATTGCTCA AGGAAGTTGA CCGCTCTGAA CAAGCGTCCA GCTCGGCCGG GCAAAGCTTG TTCGGGAATA CCATGACTGC ACTACTGCTT ATCAAGACCG AGTCCATGCT CCCCGGCAAA GGCCTCGCGC ACGATGTGGC GACGCTTGCT TACCTGGCAT CGATGACTTC CGATACCAAT CCTGGGAGCA CGTTGTTCGC CAGACATGCT GAAGCCACTG GAACATTGGA CGAATTCTTC TTGCCACGCT TCAACCGCCA AATACTGATC GATAACGCCT CGCAACCAAC GCTCATACAG TTCGAACAAC AGTTACGTTG GCGCGATCTA CTGACGAGAG AGCTTGTCAC CATCTTTGCA CTGCTGGCCT GCGCCCTGGT CAGCATTCCC ACGCTCACCC TTCGTCACTA CAAGGCACTG GAACGCGGCG TCCGTGAACA TGAACGATCG GCCTACCTGG CAACGCACGA TCTGCTGACC GGGCTACCGA ACCGTTTCCT GTTCCTTGAT CGCTTTGAGC AGGCCGTCCA GCAACATGTG CGAAACGCCA ATTCATTTGC GTTACTCCTA ATCGATCTTG ATCACTTCAA GGAGATCAAC GACAGCTACG GCCACGAGGT CGGCGACGAG GTATTGGTCG AAACCGCAAA ACGCATGACG GCCGAGATTC GGGCGTGCGA TACGGTGGCC CGCCATGGTG GTGATGAATT CGTGATCCTT CTGGCCAATA CGCTTAACGT CGACGATGCA CAAACAGTTG GCGAGAAGCT GCTGGCAGCA ATTTCGACAC CGATGAAGAC CAGCGCGGGG CAGTTGCGAC TCACCGGCAG CATCGGTGTC GCCATATACC CAGAGCATGG CACGAGCCTC GATGCAATAC GTCGAGCCGC CGACCAGGCC ATGTATCAAG CGAAGAAAAT GGGGCGGAAC ATGGTGTCAA CGCCGGGCGG CGACCCGGCA ACACTGTCGT AG
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Protein sequence | MPSLRYRPTL LALMSAWLGV IAFATHLLLS AEIGRWERNF DSEILRLSSE VKNKLDMNEA VLSGFAAFLQ AVERNDMASA TRYAASAMAS YPHIYMLEVA RQVPLAEQAE FQSTLRREWL PSFTLKDFPT ITQRPSQKLR MQNYTWPILF MYPPLPEAEE IFGVRLETVD YLGHSLALAH KSSRPVASPI FKMFEGGSAY ILLKEVDRSE QASSSAGQSL FGNTMTALLL IKTESMLPGK GLAHDVATLA YLASMTSDTN PGSTLFARHA EATGTLDEFF LPRFNRQILI DNASQPTLIQ FEQQLRWRDL LTRELVTIFA LLACALVSIP TLTLRHYKAL ERGVREHERS AYLATHDLLT GLPNRFLFLD RFEQAVQQHV RNANSFALLL IDLDHFKEIN DSYGHEVGDE VLVETAKRMT AEIRACDTVA RHGGDEFVIL LANTLNVDDA QTVGEKLLAA ISTPMKTSAG QLRLTGSIGV AIYPEHGTSL DAIRRAADQA MYQAKKMGRN MVSTPGGDPA TLS
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