| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2869 |
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| Symbol | |
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| ID | 3566333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3088823 |
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| End bp | 3089551 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637681338 |
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| Product | tRNA pseudouridine synthase C |
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| Protein accession | YP_286069 |
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| Protein GI | 71908482 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 67 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTGAAG AACTGCCGAT TCTCTATCGC GACGAGCATG TCGTCGTCAT CGACAAGCCG
TCGGGCTTGC TTGTTCATCG CTCAGAAATC GACCGTCACG AGACGCGCTT CGCCATTCAG
ATCCTTCGTG ATCAGATCGG CCAGCGGGTC TGGCCGGCAC ACCGACTTGA CCGTGGCACC
TCTGGCGTAT TGCTTTTCGG ACTGAATCCC GCCATGGCTA GCCAGCTTGG GAAGCAGTTC
GAGCAGGGCA CCGTCGAAAA AGCCTACTGG GCTGTCGTTC GGGGCTATCC GCCAGCGTCA
GGCAGCATTG ACCATCCGCT GACCCGCCAG CGCGACCCTT ATGAATTCAA AGGGGAGCAG
TGCAGCACCG AGGCTCAGCC AGCACTGACG CACTTCCGGA AGCTGGCCGA GATCGAGCTG
CCGGTCGAAG TCGACCGTTA TCCAAGCAGC CGCTATGCAC TTCTGGAACT GGAGCCGATT
ACCGGACGTC GGCACCAGAT CAGGCGCCAT TTGAAGCATC TTGCCCACCC GATCATTGGC
GATGCCACCT ATGGCAAAGG GCGTCACAAC CGCTACTTTG CCGAGCAACT CGGCTGCCAC
CGCTTGCTGC TCGCCTGCAT CAGACTCTCG TTCAACCACC CTGTCACCGG GCTGCGACTG
GACATAAAAA CGCCAGTGTC CGGCGAGTTC GCCGCCACAC TGGCGCGTTT TGGCTGGCCT
GGCAGCTAG
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| Protein sequence | MPEELPILYR DEHVVVIDKP SGLLVHRSEI DRHETRFAIQ ILRDQIGQRV WPAHRLDRGT
SGVLLFGLNP AMASQLGKQF EQGTVEKAYW AVVRGYPPAS GSIDHPLTRQ RDPYEFKGEQ
CSTEAQPALT HFRKLAEIEL PVEVDRYPSS RYALLELEPI TGRRHQIRRH LKHLAHPIIG
DATYGKGRHN RYFAEQLGCH RLLLACIRLS FNHPVTGLRL DIKTPVSGEF AATLARFGWP
GS
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