| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2479 |
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| Symbol | |
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| ID | 3568100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2677342 |
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| End bp | 2678856 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637680947 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_285684 |
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| Protein GI | 71908097 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG0845] Membrane-fusion protein
[COG5569] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 0.518843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAACCG GCCCCCTGTT CATTTTTATC GCCGTCGCCC TGACTGTCGG CGGTTTTGCC
GGCGGTTATC AGTTTGCCCG GCAGAAAACC GATGGCACGA CCGCAGTTGC TGCGGTCACC
CCGGAAAAAG CGCCAAACAA GAAACTTTTG TATTACCGCA ACCCGATGGG CCTGCCCGAC
ACCTCGCCAA CGCCCAAGAA AGACCCGATG GGCATGGACT ACATCCCGGT CTATGAAGGC
GAAGCCGATG CTGGCGGCGA CAGCGGCCTG AAAATCAGCG CCGAGAAAAT CCAGAAAATG
GGCGTCAAGG CCGAGCCGGC CAAACTGCAG GTGCTCGACA GGACGGTGCG CGCCAGCGGC
CGGGTTGAAA TCGACGAAAG CCGCACCTAC ACGGTGACCG CCAAGTTCGA AGGCTACATC
GAGCGCCTGT ACGTCAATAC CACCGGCCAG CCGGTCGGCC GCGGCCAGCC GCTGTTCGAG
GTCTACAGCC CGGAACTGGT CTCGGCTCAG CGCGAATATG TCATCGCCGC ACAAGGCGTC
AACAAACTGA ACGAAGCCGG CGGCGAAGCA CAATCGGCGA TGAAGCAACT GGCCGACTCC
AGCCTGCAAC GGCTGAAGAA CTGGGACATT TCCGATGAGC AGATCAAGGC GCTGGCCCAC
TCCGGCAACG CCAAGCGGAC GTTGACCTTC CGCGCCCCGG TGGCCGGCAT CGTCACCGAG
AAAAAGGCTG TGCAGGGCAT GCGCTTCATG CCCGGCGAGG CGTTGTACCA GATCGCCGAT
ACCTCGTCGG TCTGGGTCCA GGCCGACGTC TTCGAGCAGG ACATCGCGGC GGTTGGCGTC
GGCCAGAAGG CGAAAATCAG GATCAATGCC TATCCCGGCG AGGTCTTCGA GGGGCGCATC
GCTTATGTCT ATCCGACGCT GAAGGCGGAA ACGCGGACCG TGCCGGTGCG TATCGAGCTG
GCCAACCCGA AGGGCCGGCT GAAGCCGGCG ATGTATGCCG AAGTGGAGAT TCCGCTTGCT
GGCGCGGTGC AAGTCGTCAC CGTGCCGAAC TCGGCGGTGA TCGACAGCGG CAGCAAGCAG
GTGATCATCA TGCAACTCGG CGAAGGCCGC TTCGAGCCGC GGGTTGTGCG CCTGGGCCAG
CGTGGCAGCG AATTCGTGCA GGTACTGGAG GGGATCAAGG AAGGGGAGAT GGTGGTTTCA
TCGGCCAATT TCCTGATCGA TGCGGAAAGC AATCTGAAAG CGGCATTGGG TGGGATGCAG
AAGGCCGAAG CCGCCAAGCC GGCCACCGTC GGCCACCAGG CCGTCGGCAA GCTGAATTCG
ATCGATGCAA CGGCCGGCAC GGTCAGCATC TCGCACGAAC CCGTCGCCAG TCTGAAATGG
CCGGCCATGA AGATGGACTT CGTGCTTGCC AATCCAGCGC TGGTCAATGG CGTCAAGCCA
GGGTCAGCCA TCGACTTCGA ATTCGTCGAA CGCCAACCCG GCGAATGGGT GATCACCTCG
CTCAAGGCAC GTTAG
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| Protein sequence | MKTGPLFIFI AVALTVGGFA GGYQFARQKT DGTTAVAAVT PEKAPNKKLL YYRNPMGLPD
TSPTPKKDPM GMDYIPVYEG EADAGGDSGL KISAEKIQKM GVKAEPAKLQ VLDRTVRASG
RVEIDESRTY TVTAKFEGYI ERLYVNTTGQ PVGRGQPLFE VYSPELVSAQ REYVIAAQGV
NKLNEAGGEA QSAMKQLADS SLQRLKNWDI SDEQIKALAH SGNAKRTLTF RAPVAGIVTE
KKAVQGMRFM PGEALYQIAD TSSVWVQADV FEQDIAAVGV GQKAKIRINA YPGEVFEGRI
AYVYPTLKAE TRTVPVRIEL ANPKGRLKPA MYAEVEIPLA GAVQVVTVPN SAVIDSGSKQ
VIIMQLGEGR FEPRVVRLGQ RGSEFVQVLE GIKEGEMVVS SANFLIDAES NLKAALGGMQ
KAEAAKPATV GHQAVGKLNS IDATAGTVSI SHEPVASLKW PAMKMDFVLA NPALVNGVKP
GSAIDFEFVE RQPGEWVITS LKAR
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