Gene Daro_2186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2186 
Symbol 
ID3566680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2360816 
End bp2361601 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content55% 
IMG OID637680655 
ProductOmpA/MotB 
Protein accessionYP_285395 
Protein GI71907808 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value0.813055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATGA AAACCCCACT AATCGTTGCT GCATTGTGTC TCGCCTTCCA AGGGGCAGCT 
TTTGCCCAGT CAAAATCCCC CGAAGAGCCA GGTAAGGTGA TTGCATCTGG TACCGTTCCG
GATGAGGCAT CGCGTGCGGC GATCCTCGGC AAGCTTCGCG ATCTTTATGG CGCGGGTAAT
GTGGTTGATC GCATGGAAGT TGGCGGGGTC GTTCCGCCAA GTAACTGGAC CGAGAACATG
ACCAAGATCA TCGGTCCCAA TCTCAAGCAG GTTCATAAGG GCCAAATGCA GGTTAACGGT
ACCCAGATCG CGATCAAGGG CAATGTGGCC AATGAGGCTT TGCGCCAACA GGTGGTCAGC
AATCTGGCCA CTTCGCTCAA CCCAACCTAT ACCATCGATA ACGGCCTGGT TGCAGCTGCT
GGCGAGGCAC AGAACGTGCT GGACAAGACG CTATCCAATC GTGTCGTTGA ATTCGAGGTT
GGCGCAGCAA CGCTGACGCC GGCTGGGCGT GTCATTCTTG ATGAAATGTA TGCCGCTATC
AAGCAAATCG GCACCCCCAA GGTTCAGGTG ATCGGCCACA CTGATAGTTC GGGAAGCCGA
CAAGCCAATA TCGCACTCAG CTTGTCGCGG GCTAATTCGG TCCGCTCTTA CCTTATTGAA
AAAGGTCTTC CGGCAGATGG TTTGACTGCA GTGGGCTCGG GGCCGGATCA ACCGGTGGGT
TCGAACGATT CGTCAGAGGG GCGGGCGAAA AACCGACGCA TAGAATTCAA ACTGGCCGGT
CAATAA
 
Protein sequence
MNMKTPLIVA ALCLAFQGAA FAQSKSPEEP GKVIASGTVP DEASRAAILG KLRDLYGAGN 
VVDRMEVGGV VPPSNWTENM TKIIGPNLKQ VHKGQMQVNG TQIAIKGNVA NEALRQQVVS
NLATSLNPTY TIDNGLVAAA GEAQNVLDKT LSNRVVEFEV GAATLTPAGR VILDEMYAAI
KQIGTPKVQV IGHTDSSGSR QANIALSLSR ANSVRSYLIE KGLPADGLTA VGSGPDQPVG
SNDSSEGRAK NRRIEFKLAG Q