Gene Daro_1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1895 
Symbol 
ID3568817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2035689 
End bp2036384 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content61% 
IMG OID637680366 
ProductYgfB and YecA 
Protein accessionYP_285111 
Protein GI71907524 
COG category[R] General function prediction only 
COG ID[COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGA AACCCCTGAC TGATGCCGAT CTCGACCGGC TTGAAGAACT GCTCGAAACC 
GAAGTATTCC AGGGCGAGGC CATGCGTCTC GATGAAATCC AGGCCATGCT CTGCGCTGTG
GTCAGCGGTC CGCAACCGGT CGCCCCGGCT GTCTGGCTGA GCGAAGCGCT GGGCAAGGGG
CTGGAGGCTG GTGGCAACCC GGATGTCGAG GCCGCGCTGG AGCTGCTGCT GCGCCTGAAC
AACGACCTGG CCGCTGCCTT GCTGGCCGGC GAAACCATCG CCCCGGTGCT CTATCCGCTG
GATGAAAAGT GCGAGGACTA CGACTACGAA GCCTGGGCCG ATTCCTATAT TTTCGGTGCC
GGCCTGGCCG GTGACTGGTA CGAATTGGCC GGCAAGCATG CCGATGACCT GTCCGAACTG
CTCGAACCGT TGTTCCTGCT CAATGGCATG CTCAAGGAAG ATGCCGAAAA GAGTGGTGAA
CGCTGGTTTC CGCCGGCTGA AGAAGCCCGT CTGGTCGCCG ATATCCAGGA GAACCTGCCG
GTCATCGTCC AGACTTTGTA CAACTTCTGG CGTAACAAGC GCACCGGCGG TACGGTGCAA
CACGAAGATG CCAAGCCTGG CCGCAATGAC CCTTGCCCCT GCGGCAGTGG CAAGAAGTTC
AAGCAATGCT GCGGCAGCCC GGAAAAGCTG AACTGA
 
Protein sequence
MNPKPLTDAD LDRLEELLET EVFQGEAMRL DEIQAMLCAV VSGPQPVAPA VWLSEALGKG 
LEAGGNPDVE AALELLLRLN NDLAAALLAG ETIAPVLYPL DEKCEDYDYE AWADSYIFGA
GLAGDWYELA GKHADDLSEL LEPLFLLNGM LKEDAEKSGE RWFPPAEEAR LVADIQENLP
VIVQTLYNFW RNKRTGGTVQ HEDAKPGRND PCPCGSGKKF KQCCGSPEKL N