| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1645 |
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| Symbol | |
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| ID | 3569886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1769769 |
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| End bp | 1771019 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637680113 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_284863 |
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| Protein GI | 71907276 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.902771 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCTT TTACTCCCGC TACCATCGCT CCTTTGGCCC AGCAGTTCGG TACCCCGCTG
TGGATCTATG ATGCCGACAC CATTACGCGC CAGATTGCCG CTCTGCGGTT GTTTGACGTA
GTGCGTTTCG CTCAGAAAGC CAACTCCAAT ACACACATCC TTCGCCTCAT GAAGCGACAG
GGCGCAGTGG TGGACTCGGT GTCTTTGGGT GAAATCGAAC GCGCGTTGGC TGGTGGTTTT
ACGCCGGGCT TGCACAACGG GGACGCAGAC ATCGTGTTTA CGGCCGATCT GCTGGACCGC
GCTACGCTTG CGCGCGTGGT GGAACTCAAT ATTCCCGTGA ACTGTGGCTC CATGGACATG
CTGGACCAAT TGGGTGCGGT CAACCCGGGT CACCCGGTGT GGCTACGCAT CAACCCAGGT
TTCGGGCATG GCCATTCCAA AAAAACAAAT ACCGGTGGCG AGCATAGCAA GCATGGCATC
TGGCATGGCG ACCTAGTACG CGCCTGCGAA AAGATCAAGG CCAACGGCCT GGCCTTGCAG
GGCCTGCACA TGCACATCGG CTCAGGCGTG GACTACGCGC ACTTGCAGGA AGTGTGCGGT
GCCATGCTGA AGCTGGTAGA GGTAGTGAAT GCGCAGGGTT TGGACCTGCA CGCCATCTCC
GCGGGCGGCG GTCTGTCCGT TCCCTACCAG GCCGGTGAAC CCACGATTGA TACGGCGCAC
TACTTTTCAT TATGGGATGC AGTGCGCCAT GCCGTGGAAC AACTGCTGGA GCACCCAGTG
AAACTGGAAA TAGAACCGGG CCGCTATTTA ATGGCCGAGT CCGGCGTGCT GGTCACCGAG
GTACGCGCCA CGAAGCAACA GGGCGCCAAC CATTTTGTGA TGGTGGACGC CGGCTTCAGT
GATCTGGTTC GCCCGGCCCT ATACGGCGCC TACCACGGCA TGGAGTTGAT CCACTCTGAT
GGCACAGCGG TTAATGGCCT GCAGTTTGAC ACGGTGGTTG CCGGACCTCT GTGCGAGTCG
GGAGATGTGT TTACGCAAGG AGACGGTGGC GTGCTGTTGC ACCGGTCCTT GCCGCAGGCG
CAGGTGGGAG ATCTGCTAGT GTTGCACGAC ACCGGTGCGT ATGGCGCCTC CATGTCATCG
AACTACAACG CGCGCCCGCT GATTGCCGAA GTGCTGATGG AAAATGGTGA GCCCCGGCTT
ATTCGACGAA GGCAGACGGT GGCTGAGCTG CTCGCGCTGG AGGCGGTGTA A
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| Protein sequence | MNPFTPATIA PLAQQFGTPL WIYDADTITR QIAALRLFDV VRFAQKANSN THILRLMKRQ
GAVVDSVSLG EIERALAGGF TPGLHNGDAD IVFTADLLDR ATLARVVELN IPVNCGSMDM
LDQLGAVNPG HPVWLRINPG FGHGHSKKTN TGGEHSKHGI WHGDLVRACE KIKANGLALQ
GLHMHIGSGV DYAHLQEVCG AMLKLVEVVN AQGLDLHAIS AGGGLSVPYQ AGEPTIDTAH
YFSLWDAVRH AVEQLLEHPV KLEIEPGRYL MAESGVLVTE VRATKQQGAN HFVMVDAGFS
DLVRPALYGA YHGMELIHSD GTAVNGLQFD TVVAGPLCES GDVFTQGDGG VLLHRSLPQA
QVGDLLVLHD TGAYGASMSS NYNARPLIAE VLMENGEPRL IRRRQTVAEL LALEAV
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