Gene Daro_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1253 
Symbol 
ID3569360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1361215 
End bp1361982 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content57% 
IMG OID637679719 
Producthypothetical protein 
Protein accessionYP_284478 
Protein GI71906891 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value0.470333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCTAA CCGAAGTTAC ATTTTGGGAC AACTACTGGC GGGATTGCCC CTTGCCCAGC 
GTGGTCAACC AGCGTGATTC CTTCGACCGC TGCCTGGCCA GCGGCTTGAA GCAGCACCTC
GGCTCTGTGC AGGGGCGGGC ATTCGAAGTC GGCTGCGCGC CTGGCAAATG GCTTGCCTTT
ATGGCAAAGG AATTCGGGCT GCAGCCTGCC GGCATTGAAT ACTCTCAAGC GGGCATGCAA
GCAACGGAGC GCAATTTCGC GCTGCTTGGA CTTGAAGGCG GCAACATCAT GACGGGCGAC
TTCTTCGCCA TCGAGCCTCA AGCGCAATTC GATGTAGTCA TCTCCTTCGG CTTCATCGAG
CATTTCGACC GTCCGGAGGA GGTGGTGAAA CGCCACTTGG CGTGGCTCAA ACCGGGCGGC
AAGCTGGTGC TGGGAGTGCC CAACTTCAAT GGCGTGTACA AGCCTTTGCA AAAAGCCTTG
AAGCCTGAAA TCCTGGATAA GCATAATTTG TCCATCATGA ACCTACGCTG GTTTGAACAG
TTGGTGCACC AGTTTCCTCT GAAGCCAGTT CATATCGGCT ATCTGGGGTC TTTTGAACCC
TCCTTGCCGG TGGCCGACCG TGGCGTCAAA TCGGCTGGAC AACTGCTGGT CAAGCTGCTG
CTGAAGGCCG GCGTGTTGCT GCGCCAATTG CGCTGGCTGG ACCGGGTTAA CCATCCGGCG
CTGAGCTCCT ACATCTTGGC GATTTACGTA AAGGACGCAA GCGAGTGA
 
Protein sequence
MELTEVTFWD NYWRDCPLPS VVNQRDSFDR CLASGLKQHL GSVQGRAFEV GCAPGKWLAF 
MAKEFGLQPA GIEYSQAGMQ ATERNFALLG LEGGNIMTGD FFAIEPQAQF DVVISFGFIE
HFDRPEEVVK RHLAWLKPGG KLVLGVPNFN GVYKPLQKAL KPEILDKHNL SIMNLRWFEQ
LVHQFPLKPV HIGYLGSFEP SLPVADRGVK SAGQLLVKLL LKAGVLLRQL RWLDRVNHPA
LSSYILAIYV KDASE