| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0900 |
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| Symbol | |
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| ID | 3570002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 974415 |
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| End bp | 975554 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637679358 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_284126 |
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| Protein GI | 71906539 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 9.53304e-16 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCA CCAAGAAATT TGCAGTGGTG GCGGTGAGCG CCGCCCTTCT GTCCAATGTC
AGCCATGCCG ACATCAATGT TGGTGTGATC TTTTCCCTGA CTGGCCCGGC AGCGTCACTT
GGCAATGAGA CGAGAAAGTC AATTGACCTG ATGCCGACTA CCCTGGGCAA GGAAAAAGTC
AATTTCATTG TCATGGACGA TGCAACCGAT CCGACTAACG CAGTTAAAAA CGCTCGCAAG
CTGATCGGTG AAAACAATGT TGACGTCCTG TTTGGACCGA ATTTGACCTC TGGTGGTGTG
GCGATCGCTG ACGTGGCGAA CGAAAAGAAA GTACCGCTGT TGTCTCAGGC ACCCATCGAG
GTGGCGCCGG AAAAGTTGAA ATGGACGTTT CGGGTGGAGC CGCTGGCTGA AATCATGGTT
GGCCGTTGCG TGGCTGATAT GAAGGCAAAG GGCGCCAAAA CCGTCGCTTT CATCGGGTTT
TCCGATCCGT GGGGAGAGTT GCTGCTCAAG GCGCTGAACA AGACGGCTGA GGCAGCTGGC
ATCAAGGTCG TGGCGGTTGA ACGTTTTGGC CGTACGGATA ATAGCGTCAC CGCTCAAGCG
CTCAAGATCG TGACTGCCAG GCCGGATGCA GTGTTCGTTG GTGGTGCCGG AACGCCTGCG
GTCATGCCGC ACAGCACGCT GCGCGATCGC GGGTACACCG GCCCGGTGTA CCACTCCCAC
GCAGTCGCAA ACAAAGACTT CCTGCGCGTC GGCGGCAAGG CCATCGAAGG TGCGCGCCTG
GCGGTTGCCC CGGTGCTTGT GGCTGAGCAG TTACCTGACA CGCATCCGAA CAAGAAGAGT
GCCTTGGCGT TCCTGGCGCT ACTTGAAAAG AAGTACGGGC CTGATTCGCG TTCAACCTTT
GCTGGCGCGT CATGGGACGG CTGGGTGATC CTCGAACATG CGCTGACAGG GGCGCAGAAG
ACCGCCAAGC CGGGGACGGA TGAGTTTCGG GAGGCCGTTC GCAATGGCCT GGAAAACACA
AAGAAGGTGG TCGGCGCCAA CGGAACCTAC ACCACCAGTG CCACCGATCA CGGCGGCTAT
GACCCTGCGT CGGCAGTGCT GATCGAGGTT TCGAACGGCA AATGGAAGTA TGTCAATTAA
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| Protein sequence | MNFTKKFAVV AVSAALLSNV SHADINVGVI FSLTGPAASL GNETRKSIDL MPTTLGKEKV
NFIVMDDATD PTNAVKNARK LIGENNVDVL FGPNLTSGGV AIADVANEKK VPLLSQAPIE
VAPEKLKWTF RVEPLAEIMV GRCVADMKAK GAKTVAFIGF SDPWGELLLK ALNKTAEAAG
IKVVAVERFG RTDNSVTAQA LKIVTARPDA VFVGGAGTPA VMPHSTLRDR GYTGPVYHSH
AVANKDFLRV GGKAIEGARL AVAPVLVAEQ LPDTHPNKKS ALAFLALLEK KYGPDSRSTF
AGASWDGWVI LEHALTGAQK TAKPGTDEFR EAVRNGLENT KKVVGANGTY TTSATDHGGY
DPASAVLIEV SNGKWKYVN
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