Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0895 |
Symbol | |
ID | 3569997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 968024 |
End bp | 969088 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637679353 |
Product | TPR repeat-containing protein |
Protein accession | YP_284121 |
Protein GI | 71906534 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 0.643748 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTGA TCAACGACAT GCTGCGCAAT CTCGAGACCA AGCGTCCCGA TGACCTGGCC CGGCAGAACC TGCAGCGGGA AATACGTTCC TTGCCGGCTG CTAGCAGTGA TCATGGTCAT ACGGCCAAAT TGATTTTGGT CGGTGGCTTG TTGCTGCTGA TTGGCGCTGG TGTCCTCCAT GCGAATGGCC GTCTGCTGCC TCTGTTGGGG CTTGATCATG CGCCGGTTGT GGCGCCTGTT CCACCTGCCG TAGTTGCTCC TGCGCTATCA CCAGCGCCCG TTGTGGTCGC AGAACCGGTG GACGACAAAT TGCGCCTGGC CTCGAATCTT GAGGTCTTGC CGCTTCCCGC CGCGCCGGTC CTGCCGGTGC CTGATCCAGT CGTGCCGATA GCTGCAAGCG CGCCGAAAAG CGAACCCGCT TCGGCGATTC CGGAAGTGCC GAAGCCGGCA TCTCTCGCAC CGGTCGGGCC AGTCAAGATC GAGAAAAGCC CGATCGCGGC GACCCCGCGT GATCGGGCCG ATGCCGAGTA CCGCAAGGCA GAAGGTGCGA TGGCTTCAGG CCGTAGCGCC GAGGCCATCG AAGGCATGCG GGCAGCGTTG AAACAGGATC CCGGCTATGT CCCGGTCCGT CAGGCACTGC TCCGTCTGTT GCTCGACATG CGCAAGAACG ATGAGGCGAT GCTCGTGCTG CAGGAAGGGC TTGAGCTTCA GCCGGCCCAG ACCGGCTGGG CGATGTCACT GGCCCGCCTG CAACTGGAGC ACGGCGATCT GGCCGCAGCG GACCGCACGC TGGCTCGTTC GCAGGCTTAT GCCGAAGCCA ATGCCGACTA TGCCGGTTTT CAGGGGCACC TGAAGTCGCG TCTCGGTGCC CAGCGTCTGG CCGTTGGCCA TTATCAGCGG GCAGCGCGTC TGGCGCCGAA CGAAGGCCGC TGGTGGCTGG GGCTCGGATT GGCTCTTGAA GCGGATGGTC ACCTTCCCGA GGCGAAGGAT GCGTTCCGAC GCGGCATGGC TTCCGGGACT CTGTCGGCTG ATCTAAGCGC GATTGCCGAA CAGCATTTGC GTTAA
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Protein sequence | MSLINDMLRN LETKRPDDLA RQNLQREIRS LPAASSDHGH TAKLILVGGL LLLIGAGVLH ANGRLLPLLG LDHAPVVAPV PPAVVAPALS PAPVVVAEPV DDKLRLASNL EVLPLPAAPV LPVPDPVVPI AASAPKSEPA SAIPEVPKPA SLAPVGPVKI EKSPIAATPR DRADAEYRKA EGAMASGRSA EAIEGMRAAL KQDPGYVPVR QALLRLLLDM RKNDEAMLVL QEGLELQPAQ TGWAMSLARL QLEHGDLAAA DRTLARSQAY AEANADYAGF QGHLKSRLGA QRLAVGHYQR AARLAPNEGR WWLGLGLALE ADGHLPEAKD AFRRGMASGT LSADLSAIAE QHLR
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