| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0886 |
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| Symbol | |
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| ID | 3569949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 957786 |
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| End bp | 958637 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637679344 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_284112 |
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| Protein GI | 71906525 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 61 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.115142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCG CTACTGATTT TCATCCTGTT TCAGCTGGTG AACGCGGCTT TACGCTGGTC
GAGGTGATTG TCGTGATCGT CATCACCGGA ATACTGCTTG GTATAGTCGG CATGTTCGGG
TGGCGCCAGA TCGATGCCTA CGTTAATGTG AGCAATCGCG CCGATCTTTC CGATGCCGCC
GATACCGCCT TGCGCCGCAT TGCTCGCGAT CTTCAGTCGG CATTGCCAAA CAGCGTCCGG
CAGTCAGGGG GCTTTCTTGA GTTCGTGCCG ATTCACGATG CAGGGCGTTA TCGGGCGGAT
GTCGATAATA GTGGTGCAGG TAATCCGCTT AATTTTGGCA GCACGACCGA CAATGGCTTT
GATGTGCTCG GACCGGCGGT AACAATAACG GCGGGTGATG AACTGGTGAT ATTCAATCTC
GGTCAGACCG GTTCGGATGT CTATGCCGGA ACCAGCAGGC GGGCTATAGC CACTGCGGCT
GGCAGCGTAT CGAGTATCCA GTTCACGCTA GGGAGTGCGC CGAATCAGCA GTTTCCACTG
GCCTCTCCGA ATAGTCGCTT TCAGATTGTT GGAACTCCCG TGACCTACGA GTGCTCGGCA
AACGCGGCCA ATCCGGAGCT CGGTAGCATC ACCCGGCATT CCGGTTACGG TTTCCAAAGC
AGCCTTGCTT CCGCACCGTG GCCCTTCGGG GGCGTGTCAG CGGTATTGGT AAACGACGTT
TCGGCTTGTT CGTTCAGCTA TATCCCCGCC GTATTACAGC GCAACGGACT GGTTGTACTC
CGGCTGACCT TGACGCGGAA CGGGGAGTCG GTCGATTTGC TGCATCAGGT CGATGTCCTG
AACACGCCAT GA
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| Protein sequence | MRRATDFHPV SAGERGFTLV EVIVVIVITG ILLGIVGMFG WRQIDAYVNV SNRADLSDAA
DTALRRIARD LQSALPNSVR QSGGFLEFVP IHDAGRYRAD VDNSGAGNPL NFGSTTDNGF
DVLGPAVTIT AGDELVIFNL GQTGSDVYAG TSRRAIATAA GSVSSIQFTL GSAPNQQFPL
ASPNSRFQIV GTPVTYECSA NAANPELGSI TRHSGYGFQS SLASAPWPFG GVSAVLVNDV
SACSFSYIPA VLQRNGLVVL RLTLTRNGES VDLLHQVDVL NTP
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