Gene Daro_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0157 
Symbol 
ID3569524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp171747 
End bp172895 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content66% 
IMG OID637678592 
Productglycosyl transferase family protein 
Protein accessionYP_283386 
Protein GI71905799 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGC GCCTGCGCGA ACCGCTGCTC TACCGCTGGC TGCGCCTGAA GCGGGCGCTC 
GACAAGCGGT CGCGGCCGGC CGAAGAGCTC GGGACGCCGG CCATCCATCG AATTCTCGCC
ATTTCCTGTA CGGCGCTCGG CGATACGCTG CTGTCCACAC CCGGTCTGCG GGCGTTGCGC
CAGACCTATC CGCAAGCCTA CATCACGCTG CTGGTGCATC CATCGCTGCA ACAGCTCTTT
ACCGGCCTGG CCGATGTCGA CGAGCTGATT CCCTACGACG GCAAATGGCG TGGCTTCCGC
CGTGCGGCCA GCCAGCTCAA GGGTTACGAC CTGGCCGTCA TCCTGCACGG CAACGAGCCG
CAGGCGACGC CGCTGGCCTA TCTGTCCGGG GCCCGCCACA TCTTCAAACT GCCCAACAAC
AACTGCTGGA ATTTCCTGCT CAGCAACCAT GAGCCAGTGT TCGGCTGGGA CGATCTCGGG
CATGGCATCG GGCAGCGTCT GGCGGTGGCC AAACTGGCCG GTGCAACGGG CGAATTCGAC
CGCCGCATGA GCGTGCCGGC CCACGCCAAA GGCCGGGCCG CCGTGGACAA GGCGCTGGCT
GATCGCGGCT GGCAGGAGGC GACCATCGTC GCCTTCCAGC CTGGCGCGTC GACGATGAGC
CGGCGCTGGC CGCGTTCGCG CTTCATTGCG GCGGCAGTTG AAATGCTCAA GGCGCGGCCA
GATTTGCGTT TCGTCGTCAC CGGTTCGCCG GCCGAAGCGG CGCTGTGCCA GGAAGTGGCA
GCCGGCATCG AGGCGGCGGC GCCGTTCGCC GGCGGGTCGC GGGCCTGGGC CTCGGCCGGA
CAGTTGCCGC TGATCGCCTT GCCCGACCTG TTGCGCCGTG CCAGCCTGCT GGTGACCGGC
GATACCGGGC CGATGCACCT GGCGGTGACG GTCGAGACGC CCGTCGTCGC GCTGTTCGCG
GTGTCCGATC CGGCCCGATC CGGCCCGGGT TACGATCTGG ACAAGCACAT CATCATTCGC
AAGTGGCGGA CCTGCGACCC CTGCTTCTCG AAAAACTGTC CCTATGCCGA GCCGATCTGC
ATGGACAACA TCGCGGTCGA TGAAGTGGTT TCAGCCGTCA ATACAATCCT GAGTCGGGGG
CAAGCATGA
 
Protein sequence
MRLRLREPLL YRWLRLKRAL DKRSRPAEEL GTPAIHRILA ISCTALGDTL LSTPGLRALR 
QTYPQAYITL LVHPSLQQLF TGLADVDELI PYDGKWRGFR RAASQLKGYD LAVILHGNEP
QATPLAYLSG ARHIFKLPNN NCWNFLLSNH EPVFGWDDLG HGIGQRLAVA KLAGATGEFD
RRMSVPAHAK GRAAVDKALA DRGWQEATIV AFQPGASTMS RRWPRSRFIA AAVEMLKARP
DLRFVVTGSP AEAALCQEVA AGIEAAAPFA GGSRAWASAG QLPLIALPDL LRRASLLVTG
DTGPMHLAVT VETPVVALFA VSDPARSGPG YDLDKHIIIR KWRTCDPCFS KNCPYAEPIC
MDNIAVDEVV SAVNTILSRG QA