Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0004 |
Symbol | |
ID | 3570028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 5514 |
End bp | 5963 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637678433 |
Product | histidine triad (HIT) protein |
Protein accession | YP_283233 |
Protein GI | 71905646 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0275782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAT TCGTTGATAC CTCGCCACCC GGCCAATGTA TTTTCTGTCG CCTGATTGCC GGCGAAATCC CTGCTGCCAA GGTTTATGAG GATGAGCAGA CTCTGGCCTT CATGGACCTC GGTCAGGTCA ATCCCGGCCA TACGCTGGTC ACCGTCAAGC GCCACGCCGC GACCTTGCTC GATCTGACGC CGGACGAAGC GGCAGCAGCG ATGCGTACCG CCCAACGGGT GGCGCAGGCG GTCAAGGATA GCTTTGATCC ACCCGGACTG ACTTTGCTGC AGGCCAATGG CAAGGAAGGC GACCAGACTG TTTTCCACTT TCACCTGCAC GTCGTTCCAC GCCATGGTGA TGATGGTATT GCCCTGTCCT GGCCACGCAA GGATCCGTCG CGCGAAACGC TGGAGGGCTA TGCCTTGCGT CTGCGTCAGG CCATGCTGAC GGTCGGCTGA
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Protein sequence | MPKFVDTSPP GQCIFCRLIA GEIPAAKVYE DEQTLAFMDL GQVNPGHTLV TVKRHAATLL DLTPDEAAAA MRTAQRVAQA VKDSFDPPGL TLLQANGKEG DQTVFHFHLH VVPRHGDDGI ALSWPRKDPS RETLEGYALR LRQAMLTVG
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