| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5954 |
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| Symbol | |
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| ID | 5751575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6640990 |
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| End bp | 6641973 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641301086 |
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| Product | porin |
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| Protein accession | YP_001566967 |
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| Protein GI | 160901385 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.77832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGA TGAACCGCGT AGCCCTGGCC GTGCTGGCCG TGCTGGGTTC CACCACCGTG
ATGGCGCAAA GCAGCGTGAC GATTTATGGC CGTATCAACA CGACCGTCGA ACGCGAAAAG
ATCGGTGACC AGACCGTCAA CAAGATGGAG AACAACTCCT CGCGTTGGGG CATGCGCGGT
GTCGAAGATC TGGGCGGCGG CCTGAAGGCC GGCTTCGTGC TGGAAAGCGG TTTCGCTTCC
GACACCGGCA TGGGTTCCTC CTCCACGGGC GCGCTGACCT TCGGCCGCCA GAGCGAAGTG
AACCTGTCGG GCAGCTTCGG CAAGATCCGC ATGGGCAACT TCTTCCCCGG TTCTTACTTC
GCCACGGCCG ACTACGTGAG CATGCACAAC CATGACACGG GTACCTCGTC CGACGCGCTG
TACTTCGATC CCGTCTGGTT CGCCAGCGGC CTGGGCACCG CCAACAAGAT CTCCTACACC
ACCCCCAACA TCGGTGGCCT GACGGTCGAA GGCTCGGTCT CCATGCACGA GAAGGCCACG
CCCGCCCGCA AGAACGGCTA TGACCTGGCC GTCAACTACG ACGTGGGCCC TCTGGCCCTG
GGCGCTGGCT ACAGCCAGGT GGACGAAGAC AAGCAGGCCG CCTTCCGCGC TGCCTACACC
TTCGGCCAGT TCGTGGTCGG TGGCTACTAC CAGCGCAACG ACGAGCAGAT CCGCGGCACG
CGCAACAACT TCCGTCTGTC GGGCATGTAC ACCCTGGGCG CTTCCGAGTT CCACGTGAAC
CTGGGCCACG CCAACAAGTG GAGCAACATT GCCGACTCCG GCGCCAACCA GTGGACCCTG
GGCTACAACT ACAACCTGAG CAAGCGCACC AAGGTCTACG GCTACTACAC CAAGGTGGAC
AACAAGGCCG GCGCCAACTA CATGACCGGT GTGAAGGGCG CGGACTTCTC CTCCTTCGCG
CTGGGCGTGC GTCACGCATT CTGA
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| Protein sequence | MIKMNRVALA VLAVLGSTTV MAQSSVTIYG RINTTVEREK IGDQTVNKME NNSSRWGMRG
VEDLGGGLKA GFVLESGFAS DTGMGSSSTG ALTFGRQSEV NLSGSFGKIR MGNFFPGSYF
ATADYVSMHN HDTGTSSDAL YFDPVWFASG LGTANKISYT TPNIGGLTVE GSVSMHEKAT
PARKNGYDLA VNYDVGPLAL GAGYSQVDED KQAAFRAAYT FGQFVVGGYY QRNDEQIRGT
RNNFRLSGMY TLGASEFHVN LGHANKWSNI ADSGANQWTL GYNYNLSKRT KVYGYYTKVD
NKAGANYMTG VKGADFSSFA LGVRHAF
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