Gene Daci_5946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5946 
Symbol 
ID5751567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6627264 
End bp6628064 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content72% 
IMG OID641301078 
ProductIclR family transcriptional regulator 
Protein accessionYP_001566959 
Protein GI160901377 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCAT CCCTTGCCAG CGCTGCCCCG GACCCCACCC CTGCACGGCA GGACGAAGCG 
AACTCGGTCT CCGATCGCTC CCTGGCCGTG CTCGATTTCG TGACCCAGGC CGAGGCCCCG
CCAGGCCTCA TGGACATCGC AGCCGCGCTC AACCTGCCCA AGGCCACGGC CTCGCGCCTG
TGCTCCCACC TGGAGGCGCG GCAATGGCTG CTGCGCCATG AGGGTGACCG CAGCTTCTCC
CCCGGCCCCA AGCTGCTGAG CCTGGCGGTG CGCGCCCTGC AAGCCGACCC GCGCCAGGCC
CTGCGCCATG AGCTGCTGTC CCAACTGGTG GCCCGTCTGG GCGAGACCTG CAACCTCACC
GTGCTGGACG GCACGCGCGT GCGCTACCTG GACCGTGTCG AGACCCACTG GCCGCTGCGC
ATCCAGCTGG AGGCCGGATC GATGGTGCCC ATCCACGCCA CGGCCAGCGG CAAGCTGTTC
CTGGCCCATA TGCCTGCGGC CCGGCGCGCC GCCATCCTGG ACAGCGTGGA ACTCACCGCC
TGCACGGCCA ACACGCTGAC CACGCCCGAG GCGCTGGCGC AGGAGTGCGC GCGCATCGTG
CGTGAAGGCC ACTCCTGCGA CCGCGAGGAA TTCATGCGCG GCATGATCGC CGTGGCCGTG
CCCGTGCGCG ATGCCAAGGG CCAGTGCCGC GCCACGCTGG CCGTGCATGC GCCCGAGGCG
CGCATGCCGC TGGCGCAGGC GCTGGAGGGC CTGCCGCACC TGAAGGAAAC GGCCCAGCGC
ATGGCCGGCC TGCTGTTCTG A
 
Protein sequence
MPPSLASAAP DPTPARQDEA NSVSDRSLAV LDFVTQAEAP PGLMDIAAAL NLPKATASRL 
CSHLEARQWL LRHEGDRSFS PGPKLLSLAV RALQADPRQA LRHELLSQLV ARLGETCNLT
VLDGTRVRYL DRVETHWPLR IQLEAGSMVP IHATASGKLF LAHMPAARRA AILDSVELTA
CTANTLTTPE ALAQECARIV REGHSCDREE FMRGMIAVAV PVRDAKGQCR ATLAVHAPEA
RMPLAQALEG LPHLKETAQR MAGLLF