Gene Daci_5121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5121 
Symbol 
ID5750732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5673106 
End bp5674494 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content68% 
IMG OID641300245 
ProductNa+/solute symporter 
Protein accessionYP_001566135 
Protein GI160900553 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTCG ATATCTCGGT CGTGGTGATC TACGCGGCAG CCATGCTGCT GCTGGGCTGG 
TACGGCATGC GCCGCGCGAA GACGCAGGAG GACTTTCTCG TGGCCGGCCG CAACCTCGGG
CCGGGCCTGT ACATGGGCAC CATGGCCGCC ACGGTGATAG GCGGCGCCAG CACCGTGGGC
ACGGTGCGGC TGGGCTATGT GTACGGCATC TCCGGATTCT GGCTTTGCGC GGCGCTGGGC
GCGGGCCTGC TGGTGCTCAA CCTGTTCCTG GCCAAGCCCC TGCTCAGGCT GCGCATCTGC
ACCGTGACCC AGGTGCTGGA GCGGCGCTAC AGCGCCCGCA CCAAGCAGGC CAGCGCCCTG
GTGATGCTGG CCTACTCGCT GATGCTGGCG GCCACGTCGG TGATCGCCAT CGGCACCGTG
ATGCAGGTGC TGTTCGACCT GCCGCTGTGG ATCTCCATCC TGGTGGGCGG GGGCGTCGTG
GTCATCTACT CGGCCGTGGG CGGCATGTGG TCGCTGACGC TGACGGACAT CGTGCAGTTC
GTGATCAAGA CCGCGGGCCT GATGCTGATC CTGCTGCCCA TCTGCCTGTA CCGCGTGGGC
GGCTGGGACC AGCTGGTTGC ACAACTGCCT GCGTCCAGCT TCGATGTCAC CCACATCGGC
TGGGACACCA TCGCCACCTA CTTCGTCATC TATTTCTTCG GAATCATGAT CGGCCAGGAC
GTGTGGCAGC GCGTGTTCAC GGCCCGCAGC GAACGGGTGG CCGCCGTGGC AGGCAGCCTC
GCCGGCGTTT ACTGCGTGGT CTACGGACTG GTCGGCGCCC TGGTGGGCAT GACAGCGCGC
GTGCTGCTGC CGGACCTGGA CAACGCCAAC AATGCCTTTG CCGCCATCGT GCAGGCCAGC
CTGCCGGACG GCATCCGCGG CCTGGTGATC GCTGCCGCAC TGGCGGCCAT GATGTCCACC
GCCAGCGCCG CCATGCTGGC CGGCTCCACC GTGCTGGCCG AGGACCTCGT GCCCCTGCTG
CGGGGCGGCC GGCCGCTGGT CGATGTGCGC TGGCACCGGC TGCTGACGCT GCTGGTGGGG
CTGGCCGTGC TCGGCATCGC CCTGGTGGTG GACGATGTGC TCAATGCCCT GACCACCGCC
TACAACCTGC TGGTGGGCGG CATGCTGGTG CCGCTGATCG GCGCCATCTA CTGGCGCCGG
GCCACCACCG CGGGCGCCAT CGCCAGCATG CTGCTGGGCT GCACCACGGC CGTCGCCTTC
ATGGTCAGGG ACGGCCTGGC CGCCAACACG CCCATCTATG CCAGCCTGGC CGTGAGCACG
GCCAGCTTCA TCCTCATCAG CCTGGCGCAG CGCACGCAGC AGCGCTCGCT GTCGGGCATT
CAATCCTGA
 
Protein sequence
MLLDISVVVI YAAAMLLLGW YGMRRAKTQE DFLVAGRNLG PGLYMGTMAA TVIGGASTVG 
TVRLGYVYGI SGFWLCAALG AGLLVLNLFL AKPLLRLRIC TVTQVLERRY SARTKQASAL
VMLAYSLMLA ATSVIAIGTV MQVLFDLPLW ISILVGGGVV VIYSAVGGMW SLTLTDIVQF
VIKTAGLMLI LLPICLYRVG GWDQLVAQLP ASSFDVTHIG WDTIATYFVI YFFGIMIGQD
VWQRVFTARS ERVAAVAGSL AGVYCVVYGL VGALVGMTAR VLLPDLDNAN NAFAAIVQAS
LPDGIRGLVI AAALAAMMST ASAAMLAGST VLAEDLVPLL RGGRPLVDVR WHRLLTLLVG
LAVLGIALVV DDVLNALTTA YNLLVGGMLV PLIGAIYWRR ATTAGAIASM LLGCTTAVAF
MVRDGLAANT PIYASLAVST ASFILISLAQ RTQQRSLSGI QS