| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4800 |
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| Symbol | |
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| ID | 5750403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5296447 |
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| End bp | 5298186 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641299916 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001565814 |
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| Protein GI | 160900232 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.236914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCG ATTCCATGGC GGCGCCCGGC GCCGCCCCCC TTGCTGCGCG CGCACGGCGC
ATTCCGTCGG GCTGGGGGCC GTGGCTGGCC TTCGCGCTGA TCCTGGCCTT TTTGCTGGCC
TTTCTCATCG TGCCCGTGGG CATGGTGGTC TACACCGCCT TCGTCAATGA AGGCGGCGGG
CTCACGCTGG GGCACTTCGG CAATTTCTTC GGCCAGACCG TCTTCCGCGA GTCGTTCTTC
AACAGCCTGG GCGTGTCCCT GGCCAGCGTG TTCTTCGCCA GCCTGATCGC CGTGCCGCTG
GCCTACCTGA CCGTGCGCTT CGAGTTCCGG GGCGCGCTGC TGATACAGAC GCTGGGCGTG
CTGCCGCTGA TCATGCCGCC CTTCGTGGGG GCGGTGGCGC TGCAGCTGAT CTTCGGGCGC
AGCGGCTCGG TCAACCTGCT GCTGGACGAC TGGTTCGGCT TCACCGTGCC CATCATGGAG
GGGCTGACGG GCGTGATCTT CGTGGAGAGC ATCCACTACT TCCCGTTCAT CTTGCTCAAC
CTCGTGGCGG CCATGCGCAA TATCGACGGG GCCATGGAGG AGTCGGCGCT GAACCTGGGT
TCGCGCGGTT TCCGGCTGTT CCGGCGCGTG ATCTTTCCGC TGGCCATGCC CGGCTACCTG
GCGGGCGCGG CCCTGGTGTT CGTCAAGGTG TTCGACGACC TGGGCACGCC GCTGGTGATG
GGCGTGACCA ATATGCTGGC GCCCCAGGCC TATCTGCGCA TCACCTCGGT GGGGCTCGAT
GATCCGCTGG GCTATGTGAT CAGCGTGATC ATGATCGCGT TCTCCATCGT CGCCCTGTGG
CTGGCCGCGC GGGTGATGAA GGGCAAGGAC TACGCCACGC TGCAAAAGGG CGGCAGCGCG
CTGCAAAAGC GCCGGCTGTC GGCCTGGGAG GCGCTGCTGG CCTATGGCTG GATCGCCCTG
GTGCTGCTGG TGGTGCTGGC GCCGCACATC GGCATCTTGC TGATGTCGTT CTCCAAGGTC
TGGAGCTTCT CGGTGCTGCC CGACAGCTAC ACGCTGGAAC ACTACGCCAC GGTGTTCACC
GACTCGGGCT ACATGATCGG CAACACGCTG CTGTACTGCC TGATGGCGGC GGGCATTGAC
GTGGTGATCG GCACCGCCAT CGCCTACCTG ATCCTGCGCA CCCGGCTGCC TGCCCGGCAG
TGGCTGGACT ACCTGGCCTC GGTGGCGCTG GCGATTCCGG GGCTGGTGCT GGCCATCGGC
TACCTGCGGC TGTTCAAGGG CGTGAACCTG CCCTTCACCG ATACGCCCAT CGTCACGACC
TGGGTGCTGA TCATGCTGGC CTATGCGGTG CGGCGGCTGC CGTATGCGCT GCGCTCGTGC
ATGGCGGCGC TGCAGCAGGT GCACATCTCG CTGGAGGAGG CCGCGCAAAG CCTGGGCGCG
GGCCGCACCA GCGTGATACG GCGCGTGATG GTGCCGCTGA TGGCCGGCGG CATCCTGGCC
GGCTTCGTCA CCAGCTTCAT CACGGCAGCG GTGGAGCTGT CGGCCACCAT CATGCTGGCC
TCGGCCCAGA GCCAGGCGCC CATGAGCTAC GGCATCTACC TGTACATGCA AAGCATCTCG
GGGCGCGGGC CCGGTGCGGC ATTGGGCGTG CTGGCCGTGG TCGTGGTCGG CCTGGGCACG
TATTTCTCGC ACCGCTTCGT GGAGCGCTCG CGCGCCACCG TGCAATCGAC TTCGGAGTGA
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| Protein sequence | MSIDSMAAPG AAPLAARARR IPSGWGPWLA FALILAFLLA FLIVPVGMVV YTAFVNEGGG
LTLGHFGNFF GQTVFRESFF NSLGVSLASV FFASLIAVPL AYLTVRFEFR GALLIQTLGV
LPLIMPPFVG AVALQLIFGR SGSVNLLLDD WFGFTVPIME GLTGVIFVES IHYFPFILLN
LVAAMRNIDG AMEESALNLG SRGFRLFRRV IFPLAMPGYL AGAALVFVKV FDDLGTPLVM
GVTNMLAPQA YLRITSVGLD DPLGYVISVI MIAFSIVALW LAARVMKGKD YATLQKGGSA
LQKRRLSAWE ALLAYGWIAL VLLVVLAPHI GILLMSFSKV WSFSVLPDSY TLEHYATVFT
DSGYMIGNTL LYCLMAAGID VVIGTAIAYL ILRTRLPARQ WLDYLASVAL AIPGLVLAIG
YLRLFKGVNL PFTDTPIVTT WVLIMLAYAV RRLPYALRSC MAALQQVHIS LEEAAQSLGA
GRTSVIRRVM VPLMAGGILA GFVTSFITAA VELSATIMLA SAQSQAPMSY GIYLYMQSIS
GRGPGAALGV LAVVVVGLGT YFSHRFVERS RATVQSTSE
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