Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4500 |
Symbol | |
ID | 5750088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4924587 |
End bp | 4925813 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641299601 |
Product | glucose sorbosone dehydrogenase |
Protein accession | YP_001565514 |
Protein GI | 160899932 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0327398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGATTGC CGAAGTCTGG ACTCATCCCC TGGTTGCTCA TGGCTGCAAC CCCTGTGTTG GCGCAGATCA ATGCGGGAAC CCTGCCTGCC ACCGCATCGC CCCCGTTCAA GGTCAGCAAG GTCGCGCAAT TCGATCTGCC CTGGCGCATC GCCTTCCTGC CGGACGGGCG CATGCTGGTC ACCGAGAAGG TTGGCAAGCT GCTTCTCGCG GCCCAGGACG GGCAAAAGCT CGAAGTCACC GGCGTGCCGC CCGTGCTGCA TGAAAACCAG AACGGCCTGC TGGGTGTCTA CCTGGCCCCT TCGTATACGA GCGACGGGGC CATCTACCTG ACCTATTCGG AGCCCGGAGA AATCCGCGGC ACGTCGAGCC TGGCGCTTGC GAGCGCCACG CTCAGGATCG GTGCCGGCAC CGCTGCGCTG GAAGACCTCA AGGTCATCTG GCGCGACCCG GTCAAGGGCA AGGGCGGGCA GGTGGGTGCC GCCGTGGCTT TTTCGCCGGA CCAGAAGTTT CTGTTCCTCA CGGCCGGGGA CCGGCAGCGC TTCACGCCTG CCCAGGACCC GAATCAGCCG GCCGGCAAGA TCCTGCGGCT GACCTTGGAC GGCAAGCCCG CGCCCGGCAA TCCGATGCAG GGGCAGACCG GCGCAACGTC GGTTCCTGTG ATCGATCCGC CCAAGGACAC CGAAGCCGCC AAGACCGCGC CGGTGTTGCG CACGTTTGTC TTTGACGGTC CGAATCTGAC GCCGTCCGAG ACCTGGTCCA CGGGGCATCG CACGCCCTAC GGCCTGGCGT TCGCGCCGGA TGGGCGTCTT TGGGAGCTTG AGCATGGGCC GCGCGGCGGC GATGAGCTCA ACCTGATCGA GCCGGGCAAG AACTATGGCT GGCCGCTGGT TTCCTATGCG GTGAACTACA ACGGCGTGCC CATTGCCAGC CCGGATACGC GAGGGGACCT CACCAAGCCC GTGATCTACT GGACGCCTGT CTTCGCGCCG GGCAGCCTGA TGTTCTACAG CGGCGAGATG TTTCCGCAGT GGAAGGGCTC GGCGTTTGCG TCCGGCCTGT TGACCCGCGC CCTGCACCGG ATCGAGGTGA ACGGCGCGAG CGCCACGCCT GCCGAGCACT GGACGGTAGG CTTTCGCGTC CGCGACGTGG CGCAGGCGCC GGATGGTGCG CTGTGGCTGA TCGAGGACGA CCGCAAGGGC GGTCTGTATC GGCTCACACC GAAATAG
|
Protein sequence | MRLPKSGLIP WLLMAATPVL AQINAGTLPA TASPPFKVSK VAQFDLPWRI AFLPDGRMLV TEKVGKLLLA AQDGQKLEVT GVPPVLHENQ NGLLGVYLAP SYTSDGAIYL TYSEPGEIRG TSSLALASAT LRIGAGTAAL EDLKVIWRDP VKGKGGQVGA AVAFSPDQKF LFLTAGDRQR FTPAQDPNQP AGKILRLTLD GKPAPGNPMQ GQTGATSVPV IDPPKDTEAA KTAPVLRTFV FDGPNLTPSE TWSTGHRTPY GLAFAPDGRL WELEHGPRGG DELNLIEPGK NYGWPLVSYA VNYNGVPIAS PDTRGDLTKP VIYWTPVFAP GSLMFYSGEM FPQWKGSAFA SGLLTRALHR IEVNGASATP AEHWTVGFRV RDVAQAPDGA LWLIEDDRKG GLYRLTPK
|
| |