Gene Daci_4378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4378 
Symbol 
ID5749966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4795228 
End bp4796490 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content63% 
IMG OID641299481 
Productmonooxygenase FAD-binding 
Protein accessionYP_001565394 
Protein GI160899812 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.760367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGGG CTCCATATCG ACAGGAGAGA TTCAGCGTGG AAATCGGAAT ACTTGGCGGT 
GGAATTGCAG GCTTGAGCGT GGCACTGACT TTGCGCAGGC AGGGTTACAA CCCTCGGGTC
TACGAGCGCC GAACGGCGCC GGCAACCATG GGGGCCGGCG TGACGCTTTG GCCCAATGCC
AGCTTTGTGC TGCAAGAGCT GGGACTGCTG CAAGACATCA AGGCCATTGG CGGCCGACCA
CTGACAATGC GTCGCCAGGA TGCCGTGGGC AATGCATTGG GAGGCCTCGA TATTGCCTTG
CTGGACCGGA TGATGGGATA CCCCACCTAC ACGGTGCTGC GCAGGCACTT GCAGGAGGTA
TTGCTGGATC ATGCGGCTCG GGCAGGGATA CCAGTGGAGT TCGGGCACCG GGCGGTGGCC
ATTGAGCTGG ATGCCAATGG CAGGGCCATG GCCCATTTCG ATAACGGTGC GAGCACTCGC
CCGGACCTGC TCATTGGCGC AGACGGTCGC ATGGATTCTG TGGCGCGCAA GTTTGTCGCA
GGTGACAACA CGCCCGTCTA TCAGGGCTTC GTGAACTGGA TCGGCGTGGC GCAGGCGCAG
CATGCGCTGG TGGACGATAT TGCGATTCAG GATTTCTGGG GGGCGGGCGA GCGCTTTGGT
TGCGTGGCGA TTCGCCCCGA ACTGGTGTAT TGGGCTGCGG CCCAGGCTCG GCCCCTGTCT
GAGGCCAGAC CGGCCGCAGA TATGCGCAAG GAGGTCGATG ACCTGTTCGC GGGATGGCCT
GAACCGGTCG TGCATATCAT CCGGGCCACG CCCGCGAATG CCATCCGGCT GATTGCGGTG
CATGACTTGG AGCCGCTGCA CACATGGAGC CGGGCGAACG TGCTGCTGGT GGGTGATGCC
GCGCATGCGC CGTTGCCGAC ATCGGGGCAA GGTGCCTGCC AGGCGCTGGA AGATGCGTGG
CATTTGGCCC GGTGCCTGGA TGCCACAAGC GGCGGCTTGG ACGATGTATT CCAGGCGTTT
GCGAGAATCC GTGCCCCGAA AACAGCAAGG CTGACGGAAC AGGGTCGGGT CTTCGCACGC
GGGCTGTTCG GCACCGATCC GGAAGCCTGC CGCATACGCA ATGAGCGTGC CAAGGCGTCC
AATCCGATGC ACGACGTGCA GGTCTTGGCA GCCGGATGGG CACAGGGCCT GCCAATGCCT
GTCTGCACCG ACGGCGCGCC AGCGCAAGGG GAGGGCTTCG GCAGTCTCTT GCGCATCGAA
TGA
 
Protein sequence
MRRAPYRQER FSVEIGILGG GIAGLSVALT LRRQGYNPRV YERRTAPATM GAGVTLWPNA 
SFVLQELGLL QDIKAIGGRP LTMRRQDAVG NALGGLDIAL LDRMMGYPTY TVLRRHLQEV
LLDHAARAGI PVEFGHRAVA IELDANGRAM AHFDNGASTR PDLLIGADGR MDSVARKFVA
GDNTPVYQGF VNWIGVAQAQ HALVDDIAIQ DFWGAGERFG CVAIRPELVY WAAAQARPLS
EARPAADMRK EVDDLFAGWP EPVVHIIRAT PANAIRLIAV HDLEPLHTWS RANVLLVGDA
AHAPLPTSGQ GACQALEDAW HLARCLDATS GGLDDVFQAF ARIRAPKTAR LTEQGRVFAR
GLFGTDPEAC RIRNERAKAS NPMHDVQVLA AGWAQGLPMP VCTDGAPAQG EGFGSLLRIE