| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4207 |
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| Symbol | |
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| ID | 5749795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4608349 |
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| End bp | 4611582 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641299310 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001565223 |
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| Protein GI | 160899641 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.124797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.095515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGA TCCAAAACAC CGGAACACAG CGCGTCATCG ACTTGATGAG GCCCAACCTC
AAACACGGCA ACCGACTCGA CTGTGTAACG CCTTCGTTTT CTCTCTACGC CTTCGCAGAA
ATCCGGGAGG CGTTGTCCGC TCTGGATCGA GTCCAATTGA TCGTGCCTCC CGATAATGAG
GCGCTCGAAC TCCTGGGCAC GGAGGGCGAC CGCGCTGCGC GCAATCGTCT GCAGGCACGT
TGGCTGGCCA ATCAGTGCGC GAAATGGATC AGTGGAAAAG TAGCGCTCCG GCGGGCATCG
AGGTCGGTGC CACAGGGGGC TGCTGTCTTG CGCAGCCCGG ATGGGACACC TGCACAAGTG
GTTCTGGGCT CCTTTGCCTT CAACACATCT GGCCTTGGCC TGACGCCAGG CAATCCATTG
AACCTGATTC AGGCGTCAGA AACGGCCGAG GAAGCCGCGC AGCTCGCCCA ATGGTTCGAT
CACCAGTGGG CAGCCTTGCA AACTGCTGCT TCAACCGACC CCGAGGGTCA GGAAGAAGAG
CACGAATCCG TTCTTGAGGC GTTGCGAGCC CTTGGCGAAC ACCGTGACCC GTTCACTATC
TACACCTTGA TGCTGCACCG CCTGTTTCAG GACAGCGGTG ACGAGATGGA CGAGGAGCGC
ATCGTCAAGT CTGCCACTGG CATCCGTAAT ACCGTGGTGT GGAAAAAGCT CTTTAAGTTT
CAACGCGATG GTGTGGTGGG TGCCATCGAC AAGCTGAACC GCTTTGGCGG CTGCATCATC
GCCGACAGTG TAGGGCTGGG TAAAACCTTT GAAGCTCTGG CCATCATCAA GTATCACGAG
CTGCGCAACG ACCGCGTTCT GGTGCTGGCG CCCAAACGCC TGCGCGACAA CTGGACGCTC
TACAAGGCCA ACGACAAGCG CAACATCCTT GCGGCTGATC GGTTCAACTA CGACGTGCTC
AACCACACCG ATTTGTCGCG CGATGGCGGC CTGTCGGGTG ACATCGACCT GTCTCATGTG
AACTGGGGCA ACTACGACCT GGTGGTGATC GACGAGTCGC ACAATTTCCG CAACAAGGCC
ACGCACAAGG GCAAGGAATC GCGCTACGAC CGCCTGATGC GACGCATCAT CCGTGAAGGC
GTCAAGACCC GCGTGCTGAT GCTCTCGGCC ACGCCGGTGA ACAATCGCCT GGCCGACCTG
CGCAACCAGA TTGCCTTTGC CACCGAAGGC GATGACGCCG CCCTGATGGA GCATGGCATC
GCCAGCATCG AGGCCACGAC CCGCAAGGCG CAGGCGCAAT TCAATCGCTG GCTGGCGCTG
GACGAAGCTG AAAAGACCCC CAGTCAGTTG GTAGAAATGC TGGGGTTCGA CTACTTCACC
CTGTTGGACC ATCTCACCAT TGCCCGCTCC AGGCGGCATG TTGAGAAGTA TTACGGTACC
AGCGAGACCG GCCGCTTCCC TGACAGACTG CCGCCCATCA ACATCAAGGC CGACGTGGAC
CTTGCGGGCG AATTCCGTGC CATCCGCGAC ATCAACCAGG AAATCCGTCG GCTCACGCTC
GCCAGCTACG CGCCGCTGCG CTATGTGCTG CCCCACAAGC AGGCGGCCTA CGACGCCAAA
TACAGCACCC AGGTGCGTGG CGGCGAAGGT TTCTTCCGCC AGGCGGATCG TGAGGAAAGC
CTGATCCACC TGCTGCGCGT GAACGTGCTC AAACGCATGG AAAGCTGTGT ATCGGCCTTC
ACCCTGACCG TGCAGCGCCA ACTCAAGGAT GTAGAGAACA CACTGGCACG CATCGAATCC
CATGCCGAAG CACTGGAGGA AATCGACATT GCCGACGTCG ATATCGACGA CCCGGCGTTC
GAAGCCTTGC TGGTCGGTCG CAAGGTCAAG GTGCTGCTGG GCGATGTGGA TCTGATCCGC
TGGAAGCAGG ATCTGCTGGA AGACCGCAAC CGCCTGGCGA CCCTGCTGGC GGCAGCGCGC
CAAGTGGATG CCGCTCGCGA TGCCAAGCTG GCAGCCTTGC GCGACATGAT TGCCCGCAAA
TGCGCCCAGC CCATCAACAG CCACGATGGC AAAGCCAACC GCAAGATCAT CGTGTTCACC
GCCTTCTCGG ACACGGCGCA CTACCTCTAC GCCCAGCTCG CCCCCTGGGC CAGGGATACG
CTGGGCATGC ATGCGGCGGT CGTCACCGGC AGCGCCGGCA TCCAGGTCAC GTTGCCGGGC
CTGCGCAAAA GCATGGGCAA TGTGCTTTCG GCCTTCGCCC CGCGCGCCAA GGAGCGCCCG
CAAGACATGG CGGGTGAAGG CGAGATCGAC TTGCTGATCG CCACCGATTG CATCTCCGAA
GGGCAGAATC TGCAAGACTG CGACTGGCTG ATCAACTACG ACATTCACTG GAACCCGGTG
CGCATCATCC AACGCTTCGG GCGTATCGAT CGCATCGGCT CGCCCAACCA GCGCATCCAG
TTGGTGAACT TCTGGCCCAA CATGGAGCTG GAGGAATACA TCAACCTGGA ACAGCGCGTC
AGCGGCCGCA TGGTGCTGCT CGATGTCTCG GCCACCGGCG AAGAAAACCT GATCGAACAG
CAGTCCGGCA ACGCCATGAA CGATCTGGAG TACCGGCGCA AGCAACTGCT CAAGCTGCAG
GACACGGTGA TCGACATGGA AGATCTGTCC ACCGGCGTGG CGATCACCGA CCTCACCCTG
ACCGACTTCC GCATCGACCT CGCGCAGTTC CTTAAAAGCC ACCCCGGCAA GCTGGACACC
CAGCCGCTGG GGGCTTTTGC GGTCACCACC ACGCTGGATG CCGACATTCC CCCTGGCGTG
ATCTTTTGCC TGCAAGCCTG CGGCCCGACG GCAAAATCCG CCGCGTCGTC CGACTACCCG
CTCGCGCCGC ACTACCTGGT GCATGTCGGC GATGACGGCC ACGTATTGCT GCCCTACCCG
CAGGCCAAGC GCATCCTGGA TCGCCTCAAG CGCCTGGCGC TGGGGCGAGA ACGGCCGGAT
GACAGTGCCT GCGCGCGCTT CGACAAGGCG ACAAAAAGCG GTGAGGACAT GCGCCACGCC
CAGAAGCTGC TCGCGGCGGC CGTGGCATCC GTCGCCGGCA AGCATGAGGA ACGGGCCGTT
GCCAGCCTCT TCACACCTGG CGGCACGCAC GCCATGAAGG GCGAGTTCGC TGGTAGTGAC
GACTTCGAGG TGGTGGCATT TCTGGTGGTG CTGCCCGAGC ATGAAGCGGC ATGA
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| Protein sequence | MKLIQNTGTQ RVIDLMRPNL KHGNRLDCVT PSFSLYAFAE IREALSALDR VQLIVPPDNE
ALELLGTEGD RAARNRLQAR WLANQCAKWI SGKVALRRAS RSVPQGAAVL RSPDGTPAQV
VLGSFAFNTS GLGLTPGNPL NLIQASETAE EAAQLAQWFD HQWAALQTAA STDPEGQEEE
HESVLEALRA LGEHRDPFTI YTLMLHRLFQ DSGDEMDEER IVKSATGIRN TVVWKKLFKF
QRDGVVGAID KLNRFGGCII ADSVGLGKTF EALAIIKYHE LRNDRVLVLA PKRLRDNWTL
YKANDKRNIL AADRFNYDVL NHTDLSRDGG LSGDIDLSHV NWGNYDLVVI DESHNFRNKA
THKGKESRYD RLMRRIIREG VKTRVLMLSA TPVNNRLADL RNQIAFATEG DDAALMEHGI
ASIEATTRKA QAQFNRWLAL DEAEKTPSQL VEMLGFDYFT LLDHLTIARS RRHVEKYYGT
SETGRFPDRL PPINIKADVD LAGEFRAIRD INQEIRRLTL ASYAPLRYVL PHKQAAYDAK
YSTQVRGGEG FFRQADREES LIHLLRVNVL KRMESCVSAF TLTVQRQLKD VENTLARIES
HAEALEEIDI ADVDIDDPAF EALLVGRKVK VLLGDVDLIR WKQDLLEDRN RLATLLAAAR
QVDAARDAKL AALRDMIARK CAQPINSHDG KANRKIIVFT AFSDTAHYLY AQLAPWARDT
LGMHAAVVTG SAGIQVTLPG LRKSMGNVLS AFAPRAKERP QDMAGEGEID LLIATDCISE
GQNLQDCDWL INYDIHWNPV RIIQRFGRID RIGSPNQRIQ LVNFWPNMEL EEYINLEQRV
SGRMVLLDVS ATGEENLIEQ QSGNAMNDLE YRRKQLLKLQ DTVIDMEDLS TGVAITDLTL
TDFRIDLAQF LKSHPGKLDT QPLGAFAVTT TLDADIPPGV IFCLQACGPT AKSAASSDYP
LAPHYLVHVG DDGHVLLPYP QAKRILDRLK RLALGRERPD DSACARFDKA TKSGEDMRHA
QKLLAAAVAS VAGKHEERAV ASLFTPGGTH AMKGEFAGSD DFEVVAFLVV LPEHEAA
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