| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4052 |
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| Symbol | |
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| ID | 5749639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4458720 |
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| End bp | 4459970 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641299154 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001565068 |
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| Protein GI | 160899486 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.498255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0995443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCT TCCGCTCGAT TGCCTCTTTG CTGATCCTGC GCATCATGCT GCTGGCCGTG
GCCTGCATGC TGGTGTTTGG CGGCGCCCAC GCCTGGTGGG AGTACCGCAA GGGGCAGCAG
GAGTTTCGCC GCTCCATGGA GACGCTGGTG GCCAACAGCA TGATCTCGCT GTCCGCCGCG
TTGTGGGACA TCGAGCCGGC CCTGGTGCGC GAGCAGGTGC AGTGGCTGGG CAAGCTGCCC
CTGGTGGGAC ATGTGCAGCT GCGCGTCACC TCCACGGGCG AGATGTACGA GGCGGGCGAG
CCCAGGGATG GCCGCGCGCC TGCCGTGTCC ATGCTCATTC CGGCACCGCG TCACAGCCAG
TCCAGCCTGC CGCTGGGCGA ACTGCAGGTC TGGGAGAACC GGGGCCACTA CCTGGAGGTG
CTGCGCGACT CCACGCTGCG CGTGCTGCTG GGCTATGCGC TGTTCACGGC CCTGGTCTGC
CTGATGGTGG CCTGGGTGAT GCGCAGGGAG CTGCGCCAGC CGCTGCAGCA GATTGCGGGC
TTTGCGGCCA ACCTCAAGCC CAATGAGTTG TCGAGGCCCT TGGTGCTGGA GCGGGCGCGG
CGCGGGCAGC GCGACGAGAT CGACATGGTG GTGCAGGGCT TTGGCCAGTT GCAGCATGAC
CTGCGTGGCC ACATCGAGCA TCTGGACCTG CTGGTGGCCC AGCGCACGGC CCAGCTGGAG
GAGCTGGTGG AGGAAGTCAA GCGCATGTCG CTGACCGATG CGCTGACCGG ATGCCTCAAC
CGCCGCGCCA TGGACGAGCG CCTGGCCTCC GAGGTCGCCC AGGGCCAGCG CCTGGGTGCG
GCCCTGAGCG TGATGTTCGT GGACGTGGAC CGCTTCAAGC AGGTCAATGA CAGGCACGGC
CATGCCGCAG GCGATGCCGT GCTGCGCGAG GTGGCGCTGC GTTGCCGGCA CGCACTGGAG
CGGGAGCCCT CGGCGCAATG GATGGCGCGC TATGGCGGGG AGGAGTTCCT GATCGTGATG
CCCGGTGTGG CTGCGGCCCA GGCCTGGGCG CTGGCCGGGC AGCTGCGCGA GGCCATACGC
TCCACGCCCA TACAGGTCCA TGGCCTGGAA CTGGCGGCGA CGGCCAGCTT TGGCGTGGCG
CAACTGCAGG GTGCCGAGAG CGCGCAGGAA CTGCTGCAGC GCGCCGATGC CATGCTCTAC
GAGGCCAAGC ACGCCGGGCG CGACTGCGTG CGCGTGGCCG GCCTCACCTG A
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| Protein sequence | MPRFRSIASL LILRIMLLAV ACMLVFGGAH AWWEYRKGQQ EFRRSMETLV ANSMISLSAA
LWDIEPALVR EQVQWLGKLP LVGHVQLRVT STGEMYEAGE PRDGRAPAVS MLIPAPRHSQ
SSLPLGELQV WENRGHYLEV LRDSTLRVLL GYALFTALVC LMVAWVMRRE LRQPLQQIAG
FAANLKPNEL SRPLVLERAR RGQRDEIDMV VQGFGQLQHD LRGHIEHLDL LVAQRTAQLE
ELVEEVKRMS LTDALTGCLN RRAMDERLAS EVAQGQRLGA ALSVMFVDVD RFKQVNDRHG
HAAGDAVLRE VALRCRHALE REPSAQWMAR YGGEEFLIVM PGVAAAQAWA LAGQLREAIR
STPIQVHGLE LAATASFGVA QLQGAESAQE LLQRADAMLY EAKHAGRDCV RVAGLT
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