Gene Daci_3857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3857 
Symbol 
ID5749440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4250465 
End bp4250911 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content69% 
IMG OID641298955 
Producthypothetical protein 
Protein accessionYP_001564873 
Protein GI160899291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0901249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGAA CAGTCGCCCC CGCATCCACG CAAGCCCTGC GCTGCCCGTT CTTGCTGCTG 
GCTGCCTTGC TGTGTCTGGG CCCGTGGCCT GCATCGGCCT CCAGCCACGG CCCGGCCAAT
GCCCAGCGCT GCGGCTGGTT CGACAACCCC ACGCCCGCCA ATGCCTCGCT GACCGATCGC
GATACCGACT GGACCGTTGG CGTGCAGGGC GGCCACCAGG CCCAGGGCGA CTGGCCCCGC
TTTGCAGACC GTGACTGGGT GCGTACCGGC CATGGCAGCC ACGGCTATGG CTGCGCCTGC
ATGAAGGTGT CCACCGATGA CAAGGAGCAG ATCGTTCAGA TCTTCTCTGC CCGTTCGCGC
CCTCTTTCCG CCTGCCGCCA AGACCCGGCT TTGAAGGCGA AGGAGCCCGT GACCCCCCTG
GCGGCTGCCC GGCCGGCCGG TTCCTGA
 
Protein sequence
MHGTVAPAST QALRCPFLLL AALLCLGPWP ASASSHGPAN AQRCGWFDNP TPANASLTDR 
DTDWTVGVQG GHQAQGDWPR FADRDWVRTG HGSHGYGCAC MKVSTDDKEQ IVQIFSARSR
PLSACRQDPA LKAKEPVTPL AAARPAGS