| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3688 |
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| Symbol | |
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| ID | 5749271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4053311 |
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| End bp | 4054513 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298787 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001564705 |
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| Protein GI | 160899123 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00755497 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.13811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCTG CCTTCGCTCC CATGCCCAAC ACCGAGGGCT ACTTCGGCCC CTACGGCGGC
CAGTTGGTCC CGCCCCACCT CAAGCAGGCC ATGGACGACA TCAACACCGC CTACGCCGAA
ATCACCAAAC GCCAAGACTT CCAGCAGGAA CTGGCCCAGC TCTTCGCCGA CTACGTGGGC
CGCCCCAGCC CCATCTTCCA CGCGCGGCGC CTGTCGGAGC AGCTCGGCGG CGCACAGATC
CACCTCAAGC GCGAAGACCT CAACCACACC GGCGCCCACA AGATCAACCA CTGCCTGGGC
GAAGCCCTGC TGGCCAAGTT CATGGGCAAG AAAAAGGTCA TCGCAGAAAC CGGCGCCGGC
CAGCACGGCG TGGCCCTGGC CACGGCCTGC GCGCTGGTGG GCATTCCCTG CGAGATCCAC
ATGGGCCAGG TGGACATCGA GAAGGAACAT CCCAACGTCA CCAAGATGCG CATCCTGGGC
TGCAAGCTCG TGCCCGTCAC GCGCGGCGCG GCCACGCTCA AGGAGGCAGT GGACAGCGCA
TTCGAGGAAT ACCTCACCAA CCCCACCGAC TACATCTACG CCATCGGCTC CGTGGTCGGC
CCCCACCCGT TCCCGATGAT GGTGCGTGAC TTCCAGAGCA TCATCGGCCG CGAGGCGCGC
GAGCAATTCC AGGCCAAACA CGGCAAGCTG CCCGACCATG TGGCAGCCTG CGTGGGCGGC
GGCTCCAACG CCATGGGCAT CTTCACCGCC TTCCTGGGCG ATGCCTCGGT CAAGCTCGTC
GGCGTGGAGC CCTCGGGCGA AGGCACGGAC AAGCCCGGCC GCCACGCAGC CACCCTCAGC
ATGGGCAAGC CCGGTGAAAT CCACGGCATG AAGTGCTACG TGCTGGAAAA CGCGGACGGC
ACGCCCGCTG CCGTGCACAG CATTGCCTCG GGCCTGGACT ATCCGGGCGT GGGCCCGCAG
CACAGCTACC TCAAGGATCT GGGCCGCGTG CAGTACGAAT CCGTCACCGA CAAGGAATGC
CTGGACGCCT TCATGCAGCT GTCGCGCGTG GAAGGCATCA TCCCCGCGCT GGAAAGCGCC
CACGCCGTGG CCTGGGCCAT GCGCGTGGCG CCCGGCCTGC CCAAGGACCA GCACATCCTC
ATCAACCTCT CGGGCCGGGG CGACAAGGAC GCCGACTACG TGGCCAAGGT GCTGGGCCTC
TGA
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| Protein sequence | MTSAFAPMPN TEGYFGPYGG QLVPPHLKQA MDDINTAYAE ITKRQDFQQE LAQLFADYVG
RPSPIFHARR LSEQLGGAQI HLKREDLNHT GAHKINHCLG EALLAKFMGK KKVIAETGAG
QHGVALATAC ALVGIPCEIH MGQVDIEKEH PNVTKMRILG CKLVPVTRGA ATLKEAVDSA
FEEYLTNPTD YIYAIGSVVG PHPFPMMVRD FQSIIGREAR EQFQAKHGKL PDHVAACVGG
GSNAMGIFTA FLGDASVKLV GVEPSGEGTD KPGRHAATLS MGKPGEIHGM KCYVLENADG
TPAAVHSIAS GLDYPGVGPQ HSYLKDLGRV QYESVTDKEC LDAFMQLSRV EGIIPALESA
HAVAWAMRVA PGLPKDQHIL INLSGRGDKD ADYVAKVLGL
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