Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3339 |
Symbol | |
ID | 5748924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3663227 |
End bp | 3664393 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641298443 |
Product | mandelate racemase/muconate lactonizing protein |
Protein accession | YP_001564362 |
Protein GI | 160898780 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.613809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.494649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG TCAACATCCT CGAATCCACC CGTCCCATCA AATCGGACAT CCGCAACGCC TACATCGATT TCTCGAAGAT GACGCTCAGC CTGGTGGCCG TGGTCACGGA CGTGATCCGC GACGGCCGCC CCGTCATCGG CTACGGCTTC AACTCCAACG GCCGCTACGG CCAGGGCGCG CTGATGCGCG AGCGCTTCAT CCCGCGCGTG CTGGAGGCCG AGCCCGCCAG CCTGCTGGAC GACAGCGGCG ACAACCTGGA CCCGCACAGG ATCTGGGCGC GCATGATGAT CAATGAAAAA CCCGGCGGCC ACGGCGAGCG ATCGGTGGCC GTGGGCACCA TCGACATGGC CGTCTGGGAC GCCACGGCAA AAATAGCGGG CAAGCCCCTG TACCAGCTGC TGGCCGAGCG CTACGGCAGC GGCACGCCCA ACCCGCGCGT CTTCGTCTAT GCCGCTGGCG GCTACTACTA CCCCGGCAAG GGCCTGGACG GCCTGCGCCG CGAGATGGAA AGCTACCTGG AGCGCGGCTA CTCGGTGGTG AAGATGAAGA TCGGCGGCGC CTCGCTGGCC GAGGACTGCG AGCGCATCGA GTCCGTGCTC AAAATTCTGG GCCCGGGCCA GCAGCTGGCC GTGGATGCCA ACGGCCGCTT CGACCTGGCC ACCGCGCTCG ACTATGGCCG CGCCCTTGGC CAGTACCCGC TGTTCTGGTA CGAGGAAGCC GGCGACCCGC TGGACTACGA ACTGCAGGCC CGCCTGGGCG AGGTCTACCA GGGTCCCATG GCCACGGGCG AGAACCTGTT TTCCATGCAG GACGCGCGCA ACCTGATCCG CCACGGCGGC ATGCGCCCGG ACCGCGACTG GCTGCAGTTC GACTGCGCGC TCAGCTACGG CCTGGTCGAG TACCTGCGCA CGCTGGACAT GCTCAAGGCC CATGGCTGGT CGCCCAGCCG CTGCATTCCG CACGGCGGCC ACCAGATGTC GCTGGCCATT GCCGCCGGCC TGGGCCTGGG CGGCAACGAA AGCTACCCCG ACCTGTTCCA GCCCTATGGC GGCTTCCCCG ACGGCGTGAA GGTGGACAAC GGCCACGTCA CCCTGCCGCC GCTGCCGGGC ATAGGCTTCG AGGGCAAGGC CGACCTGATC GCCGAGATGC GCGCGCTGGC GGCCTGA
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Protein sequence | MKIVNILEST RPIKSDIRNA YIDFSKMTLS LVAVVTDVIR DGRPVIGYGF NSNGRYGQGA LMRERFIPRV LEAEPASLLD DSGDNLDPHR IWARMMINEK PGGHGERSVA VGTIDMAVWD ATAKIAGKPL YQLLAERYGS GTPNPRVFVY AAGGYYYPGK GLDGLRREME SYLERGYSVV KMKIGGASLA EDCERIESVL KILGPGQQLA VDANGRFDLA TALDYGRALG QYPLFWYEEA GDPLDYELQA RLGEVYQGPM ATGENLFSMQ DARNLIRHGG MRPDRDWLQF DCALSYGLVE YLRTLDMLKA HGWSPSRCIP HGGHQMSLAI AAGLGLGGNE SYPDLFQPYG GFPDGVKVDN GHVTLPPLPG IGFEGKADLI AEMRALAA
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