| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3333 |
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| Symbol | |
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| ID | 5748918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3656945 |
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| End bp | 3657577 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641298437 |
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| Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
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| Protein accession | YP_001564356 |
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| Protein GI | 160898774 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.277634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCACTA TCGAAAAAGG ATTGATGGTA GACAAAAGCG TCGAAGTCAA GACCTATCCA
TCCATAGAGC ACGGCGCCTT GCTGGCCGTA ACCTCCATCG TGCTGCACCG CACAGACTCG
TCCACGGCCG CCAGCGTGCT CAATGCCTAC AAGAGCGGCC AGAAGACGGG GGCGCACTTT
CTGATCGAGA AGGACGGGAA GATCTACCAA ACCGCCAGTC TGGAAAAGAT CTGCTGGCAT
GTGGGAATTC TTCAGCCGCG CTGCGTCAAC GAGAGCACCT GCGATCCCAC GGAACTCAAG
AACATCAATG CCCTGCTGCA CCAAAAGGGC CTGAGCTTCA GCAAGCGGGC CAAGAATGTG
TCATCGCACG AGAACACAAA GGCCTACCCG TTGCGCTATC CGGCCAACAG CGACTCCGTG
GGCATCGAGG TGGTGGGCCG TTTCCTGCCA TCGACCAAGG ATTACGAGGC GCCCACCCAA
TCGCAGCTGT TCCAGACCAA ATGGCTGACC CAGCAATTGG TGGACCACTA CAAGCTCAAA
CTGCTGTCCG ATGTCTACTC CCACGGCGCC ATTGCCCGCA AGGAGGCGAC CGAAGGCGCC
CAATTGCTGC GCTACATCTT CACGGGAGCC TGA
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| Protein sequence | MATIEKGLMV DKSVEVKTYP SIEHGALLAV TSIVLHRTDS STAASVLNAY KSGQKTGAHF
LIEKDGKIYQ TASLEKICWH VGILQPRCVN ESTCDPTELK NINALLHQKG LSFSKRAKNV
SSHENTKAYP LRYPANSDSV GIEVVGRFLP STKDYEAPTQ SQLFQTKWLT QQLVDHYKLK
LLSDVYSHGA IARKEATEGA QLLRYIFTGA
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