| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3121 |
|---|
| Symbol | |
|---|
| ID | 5748705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3438773 |
|---|
| End bp | 3439834 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641298224 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001564144 |
|---|
| Protein GI | 160898562 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGTA ACAGCGTCGC CATCGACATC CGGCAATGCG CCAAGACCTA TGCCGACGGC
ACCCGCGGCC TGCAGGCCAC CGACCTGCGC GTGGAGCCCG GCGAGGTGCT GGCCCTGCTG
GGCCCCTCGG GCTGCGGCAA GACCACGCTG CTGCGCATCA TCGCGGGGCT GGAGACGCCG
GATGCGGGCA GCCGCATCGC CTTCGGCGAC ACCGACGTCA CCCGCGTGCC CATAGAAAAG
CGCCAGGTGG GCATGGTGTT CCAGCACTAC GCGCTGTTCC CGCAGATGAG CGTGCAGGCC
AACATAGCCT ACGGCCTGCG CATACGCGGC GTGTCCGAGC AGGAGCAGCG CCGCGTGGTG
GGCGAACTGG TGGACCTGGT GCGCCTGAAC GGCCTGGAGC ACAAGCGCCC GGCCGAACTG
TCCGGCGGCC AGCGCCAGCG CGTGGCCCTG GCCCGCGCCG TGGCATCGCG CCCGCGCGTG
CTGCTGCTGG ACGAGCCGCT GACCGCGCTG GACGCCAAGC TCAAGGAAAC CCTGCGCGAC
GAGCTGGCCC AGCTGCTGCG CCAGCTGCGC ATCACCGCCG TCCATGTCAC GCACGACCAG
CAGGAGGCCA TGGCCATTGC CGACCGCATG GCCGTCATGC AGGCAGGCCG CATCCTGCAG
GTGGGCGACG GTGAAAGCCT GTACCGCCGC CCGGCCCATC CCTTTGTCGC CACCTTCCTG
GGGCGCGTGA ACCAGGTCGA ACGCAGCGAC GACGATGCGC GCAGCAACCG GCTGGCGCTG
GCCGGCATGG AGCTGGCCTG CCCGGCCGAG TGCACGGGCG CGGCCCGGCT GCTGCTGCGC
CCTGAAGACA TCGAGGTCTG CGCCGCCGGC ACGCCGGGCG CCGTGCCCGC ATCGGTGGCG
CGCCGCGTTT TCCTGGGCGA TCGCCTGCAG CTCACGCTGG AGCTGGCGGG CCACACGCCG
CTGATGGCCG ACGTGGCCCG CGACCACGCC GCGCAATCGG GCGACCGCGT GGCCTTGCGC
ATCGCCCCCC ACCAATGGAT GCCCAACCAT GCCCACGCCT GA
|
|---|
| Protein sequence | MESNSVAIDI RQCAKTYADG TRGLQATDLR VEPGEVLALL GPSGCGKTTL LRIIAGLETP
DAGSRIAFGD TDVTRVPIEK RQVGMVFQHY ALFPQMSVQA NIAYGLRIRG VSEQEQRRVV
GELVDLVRLN GLEHKRPAEL SGGQRQRVAL ARAVASRPRV LLLDEPLTAL DAKLKETLRD
ELAQLLRQLR ITAVHVTHDQ QEAMAIADRM AVMQAGRILQ VGDGESLYRR PAHPFVATFL
GRVNQVERSD DDARSNRLAL AGMELACPAE CTGAARLLLR PEDIEVCAAG TPGAVPASVA
RRVFLGDRLQ LTLELAGHTP LMADVARDHA AQSGDRVALR IAPHQWMPNH AHA
|
|---|
| |