Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3115 |
Symbol | |
ID | 5748699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3432014 |
End bp | 3433336 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641298218 |
Product | cerebroside-sulfatase |
Protein accession | YP_001564138 |
Protein GI | 160898556 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3119] Arylsulfatase A and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.100154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCAC CAAACATCGT GCTCATCGTC GCGGACAACC TGGGCTGGGG CGAGCTGGGC TGCTACGGCG GCGGTGCGCT GCGCGGCGCG CCCACTCCGC GTATCGACCA GCTGGCCACC GAGGGACTGC TGCTGCAGAA CTTCAACGTG GAAAGCGACT GCGTGCCCAC GCGCTCGGCC CTGATGACGG GGCGCCATCC CATCCGCACG GGCGCCCTGC AATCGGTGCC GGCCGGGCTG CCCCAGGGCC TGACGCGCGG CGAGACCACG CTGGCCCAGT TGCTGTCGGC CCAGGGATAT GCCACGGCGC ATTTCGGCAA ATGGCATCTG GGGGACATTC CGGGCCGTTA TCCCTCGGAC CGGGGTTTCG ACGAGTGGTA CGGCATTCCG CGCACCACGG ACGAAAGCCA GTTCACCGCG ACCACGGGCT ACGACCCTCT GGTGGCACCC CTGCCCCACA TCATGGAAGG CCGCGCGGGC GCGCCCTCGG ACGATGTCAA GGTCTACGAC CTGGAATCGC GGCGCAACAT CGATGCCGAG CTGGTGGAGC GCTCGCTGGA CTTCATGCGC CGCAACCACG CCCGGGACCG CCGCTTCTTC CTGTACCTGC CCCTGGTGCA CCTGCACTTT CCCACGCTGC CGCATGCGGA TTTCGCGGGC CGCACCGGCC AGGGCGACTT TGCCGACTCC ATGGTGGAGA TGGACCACCG CGTGGGCCAG ATCTCGGACG AGATCGACCG GCTCGGCCTG CGCGAGGACA CGCTGTTCAT CTTCTGCAGC GACAACGGCC CCGAGTTCCG CCAGCCCTAC CGCGGCACGG CCGGCCCCTG GCGCGGCACC TACCACACGG CCATGGAGGG CAGCCTGCGC GTGCCCTTCA TCGCACGCTG GCCGGGCCGC ATCCAGGCCG GGCGCACCAG CAATGAAATC ATGCACGTGA CCGACATCTT CTCCACCCTG GCGGCGGTGG CGGGCGCTGC CGTGCCGCAG GACCGGCCCA TCGACGGCCT GGACCAGACG GCCTTCCTGC TGGGCGAGCC CCGGTCCGCG CGCGAGGGCT TTCTCTTCTA CATCAAGGAC CAGCTGCGGG CCGCGAAGTG GCGCGACTGG AAGCTGCATT TCTACTGGGA GCCCGAGGTC AACGAGAGCA AGGGCAAGCT GGAGTCCCCC TACCTGTTCA ACATCGTGCG CGATCCCAAG GAGGAGCATG ACGTGCTGAT CTTCAACACC TGGGTGCTCA ACCCCATGCT GACCATGGTC CAGCGCTTCA ACGAAAGCTG CAAGGCACAC CCCAACACCG CGCCCGGCGC CCCCGACCAA TGA
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Protein sequence | MNPPNIVLIV ADNLGWGELG CYGGGALRGA PTPRIDQLAT EGLLLQNFNV ESDCVPTRSA LMTGRHPIRT GALQSVPAGL PQGLTRGETT LAQLLSAQGY ATAHFGKWHL GDIPGRYPSD RGFDEWYGIP RTTDESQFTA TTGYDPLVAP LPHIMEGRAG APSDDVKVYD LESRRNIDAE LVERSLDFMR RNHARDRRFF LYLPLVHLHF PTLPHADFAG RTGQGDFADS MVEMDHRVGQ ISDEIDRLGL REDTLFIFCS DNGPEFRQPY RGTAGPWRGT YHTAMEGSLR VPFIARWPGR IQAGRTSNEI MHVTDIFSTL AAVAGAAVPQ DRPIDGLDQT AFLLGEPRSA REGFLFYIKD QLRAAKWRDW KLHFYWEPEV NESKGKLESP YLFNIVRDPK EEHDVLIFNT WVLNPMLTMV QRFNESCKAH PNTAPGAPDQ
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