Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2418 |
Symbol | |
ID | 5747981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2669255 |
End bp | 2672554 |
Gene Length | 3300 bp |
Protein Length | 1099 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641297500 |
Product | acriflavin resistance protein |
Protein accession | YP_001563441 |
Protein GI | 160897859 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCA GCGCACCCTT CATCCTGCGA CCCGTCGCGA CCAGCCTGCT GGCCCTGGCG CTGCTGGTGT CGGGCGTGCT CGCGTATTTC CAGTTGCCGG TGGCGCCCCT GCCCAACGTC ACCTTCCCCG TGATCGTGGT GCAGGCCAGC ATGGCGGGGG CCAGCCCGGA AACCATGGCC TCCACGGTGG CCGCGCCGCT GGAGCGACGG CTGGGCACCA TTGCCGATGT CACCCAGCTC ACCTCGGTCA GCAGCGTGGG CTCCTCCTCC ATCGTGGTGC AACTGGGGCT GTCGCGCGAC ATCAATGGCG CGGCGCGCGA CGTGCAGGCC GCGATACAGG CCGCGCGCGG CGATCTGCCC AGCACGCTGC GCAGCAATCC CACCTACCGC GAGTTCAACC CAGCAGACAC GCCGGTGGCC GTGCTCGCGC TGACCTCGGA CACCCTGACC AAGGCGCAGC TCTACGACTC GGCCAGCTCG GTGATACAGC AGCAGTTGTC GCAGCTGAGC GGGGTGGGCC AGATCACGCT GGGCGGAGGT GCCCTGCCCT CGGTGCGCGT GGAGCTGGAG CCCGGCAAGC TGGCCAGCTA CGGCATCGGG CTGGAAGACG TGCGCGCGGC CATAGGCGCA GCCAACGCCA ACAGCGCCAA GGGCCATCTG GATGAAGGGC CGCAGCGCTT CCAGGTGCTG TCCAACGACC AGATCTCCAA GGCCGCGCCC TACCGCGACC TGGTGATCGC CTACCGCAAC AACGCAGCCG TGCACCTGTC GGACGTGGCC AGCGTGCAGG ACTCCAACGA GAACCTGCGC AACGCCGGCC TTTACAACGG CAAGTCGGCC GTGCTGGTCA TCGTCTACCC CATGCCGGGC AGCAACATCG TCAAGACGGC GGCGCAGATC CGGGCAGTGC TGCCCGTGGT GCAGGCCAGT CTGGCAGGGG ACATCCGCCT CGCCCTGGTG CTGGACCGCT CGGAGTCGGT CAACGCCTCG GTGTCGGATA CCGAGCGCAC CCTGTTCATT GCGGTCCTGC TGGTGATCGG CGTGGTCTTC GTGTTCCTGC GCTCGCCACG CGCCGTGCTG ATCCCGGCCG TGGCGCTGCC GCTGTCCATC GTCGGCAGCT TCGGGCCCAT GTACCTGCTG GGATACAGCA TAGACAACCT CTCGCTCATG GCCCTGACCA TCGGCACGGG CTTCGTCGTG GATGACGCCA TCGTGGTGCT GGAGAACATC ATGCGGCACA TGGAGGACGG CATGCCTCCC AGGGAGGCGG CGCTGCGCGG CAGCGCAGAG GTGGGATTCA CGGTGATGTC CATGAGCCTG TCGCTGATCG CGGTGTTCCT GCCCATCCTG CTCATGCCGG GCATCGTCGG GCTGCTGTTC CATGAGCTGG CGATGACGCT GTCCATCGCC ATCCTGCTGT CGCTGGTGGT CTCGCTGACC GTCACGCCCA CGATGTGCGC CTACCTGCTC ACGCGCGAGT CGCTGGACCG CCCGCCCACC CGGGTGCGCA GGGCGCTGGA GGCCGGGTTC GAGCGGTTCA GGCAAGGCTA CAGCCGGTCG CTGGACGCGG TGCTCGACCA TGCGCTGCTC ACGGGCATCG TGCTGGTGCT GCTGGTGGCC GGCAATGTGG CGCTGCTGCG CCATGTGCCG GGCACCTTCT TTCCCGAGCA GGACACGGGC ATTCTGATCG GGCAGATCAT TGCGGACCAG AGCATCTCGT TCCCCGCCAT GGAGAAAAAA CTCGCCCAAC TGCAGCAGAT CGTGCAGGAC GACCCCGCCG TCCAGGCGGT GGCGGGCTTC ACCGGTGGGC GGGCGCTGAA TTCGGCCAAT GTCTTCATCC AGCTCAAGCC CCTGTCCCAG CGCGGCCTGT CGGCCTCGCA GGTGGTGGAC CGCCTGCGGC CCCGGCTCAA TGCGGTGTCC GGTGCCCGGC TGTTCCTGCA GGCGCAGCAG GACCTGCGCA TCGGCGGGCG GCAGTCGGCC GCCGAATACC AGTACACGCT GACCTGCGAC GACGCGCAGA CGCTCAATGT CTGGGTGCCC CGGCTGCTCG AACAGCTGGG CAGCCAGCCC GGCAGGCTGC TCGACCTGAA CTCCGACCTC CAGCAACACG GCCTGCAGAC CTTCGTGACC GTGGACCGCG CCATGGCCGC GCGCTACGGC TTTCAGCCCA ACCAGATCGA CAGCGTGCTC TACGACGCCT TCGGCCAGCG CACGGTCTCC ACCATCTACA ACCCGCGCAA CCAGTATTTC GTGGTCATGG AGTACGCACC GCGCTACTGG CAGTCGCCCG AGGCCCTGGA CCAGATCTAT CTCAGCACGG CCGCCGCCAA CTCCGCAGGC ACGCAGCAGA CGCAGATGTC GGGCAGGCTG GTTTCGGGGA TCACGGTCTA TCACGCCACG GGCGCCACAG GTGCCACCAC CACAGGCGCA GGCAGCGCCC AGGCCAACCT GCTCAACAAC GCCATCTCCA ACAGCCGCGG CGGCAGCTCC AGCGGCAGCG CCGTCGCCAC GGCGGCGGAG ACCATGGTGC CGCTGTCGGC GCTGGCCACC TGGAGCAGCA GCCACACGGC CACCCAGGTG AACCACCAGG GCGGCACGGT GGCCGCCACC ATCTCCTTCA ACCTGCCACA GGGCGGCTCG CTGAGCCAGG CGCAGCAGGC CATAGACGAG GCGGTCGCGC AGATCCGGAT GCCGGCCACG GTCCACGGCT CTTTTGCCGG TGCGGCCCAG GCCTACGCCC AGTCCGTGGG CGCGGTGCCG CTGCTGATCC TTGCGGCCCT GGCAACGGTC TACCTGGTGC TGGGCGTGCT CTACGAAAGC GCCATCCATC CCCTGACGAT TCTCTCGACA CTGCCCTCGG CCGGCATAGG CGCCACGCTG GCGCTGCTGA TCTTCGACAC GCCGTTCTCG GTGATCGCCA TGATCGGCGT GATCCTGCTG ATCGGCATCG TCAAGAAGAA CGGCATCATG ATGGTGGACG TCGCCATACA GGAGCAGCGC ATGGCCGGCA GGAATGCGCG CGAGGCCATC CACGGCGCCG CCGTGCTGCG GCTTCGGCCC ATCATGATGA CCACGGCTGC AGCCGTGCTG GGCGCGGTGC CGCTGGCCAT CGGCATAGGA CAGGGCGCAT CGCTGCGCCA GCCGCTGGGC ATCACGGTGA TGGGCGGGCT GATCCTGAGC CAGGTCTTCA CCCTCTACAC CACGCCGGTG ATCTATCTCT TCCTCGACCG GCTGCGCGCG CGCCTGGCGC GCTCGGCCTG GCGCATGCCC TGGAACCGCG CAGAGGAGTC CCTGCCATGA
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Protein sequence | MNISAPFILR PVATSLLALA LLVSGVLAYF QLPVAPLPNV TFPVIVVQAS MAGASPETMA STVAAPLERR LGTIADVTQL TSVSSVGSSS IVVQLGLSRD INGAARDVQA AIQAARGDLP STLRSNPTYR EFNPADTPVA VLALTSDTLT KAQLYDSASS VIQQQLSQLS GVGQITLGGG ALPSVRVELE PGKLASYGIG LEDVRAAIGA ANANSAKGHL DEGPQRFQVL SNDQISKAAP YRDLVIAYRN NAAVHLSDVA SVQDSNENLR NAGLYNGKSA VLVIVYPMPG SNIVKTAAQI RAVLPVVQAS LAGDIRLALV LDRSESVNAS VSDTERTLFI AVLLVIGVVF VFLRSPRAVL IPAVALPLSI VGSFGPMYLL GYSIDNLSLM ALTIGTGFVV DDAIVVLENI MRHMEDGMPP REAALRGSAE VGFTVMSMSL SLIAVFLPIL LMPGIVGLLF HELAMTLSIA ILLSLVVSLT VTPTMCAYLL TRESLDRPPT RVRRALEAGF ERFRQGYSRS LDAVLDHALL TGIVLVLLVA GNVALLRHVP GTFFPEQDTG ILIGQIIADQ SISFPAMEKK LAQLQQIVQD DPAVQAVAGF TGGRALNSAN VFIQLKPLSQ RGLSASQVVD RLRPRLNAVS GARLFLQAQQ DLRIGGRQSA AEYQYTLTCD DAQTLNVWVP RLLEQLGSQP GRLLDLNSDL QQHGLQTFVT VDRAMAARYG FQPNQIDSVL YDAFGQRTVS TIYNPRNQYF VVMEYAPRYW QSPEALDQIY LSTAAANSAG TQQTQMSGRL VSGITVYHAT GATGATTTGA GSAQANLLNN AISNSRGGSS SGSAVATAAE TMVPLSALAT WSSSHTATQV NHQGGTVAAT ISFNLPQGGS LSQAQQAIDE AVAQIRMPAT VHGSFAGAAQ AYAQSVGAVP LLILAALATV YLVLGVLYES AIHPLTILST LPSAGIGATL ALLIFDTPFS VIAMIGVILL IGIVKKNGIM MVDVAIQEQR MAGRNAREAI HGAAVLRLRP IMMTTAAAVL GAVPLAIGIG QGASLRQPLG ITVMGGLILS QVFTLYTTPV IYLFLDRLRA RLARSAWRMP WNRAEESLP
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