| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1879 |
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| Symbol | |
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| ID | 5747436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2077915 |
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| End bp | 2080440 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641296957 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001562904 |
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| Protein GI | 160897322 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.432996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCC CCCTCCCCCA CCAGCCCCAG GACGGCCTTG CAGCCGCCCG GGGCTGGCCT
GCGTCCATGG GGATGGCTGG GGTGGCAGCG GTGCTGGGGG TGGCGATGCT GGTTGCCACG
GCAGCGGACT GCGTCCATGC GGCGCCGTCC GCCCAGGCCG GCCAGGCAGC CCAGCGCAGC
TTTTCGATTG CGGCCGGCCC TCTCACGCAT GTGATCGCGC AGTACGCCAA CCAGGCGGGC
GTTGCGCTGT CGTTTGATGC CGCGCAGCTG GGCCGGCTGC AGTCCCCGGG GCTGCAGGGC
AGCTATGGCG TGGAAGACGG TTTTGCCAGG CTGCTGCAGG GCACGGCGCT GCAGGCGGTG
CGCGAGTCCA GCGGCGTCTA TACGCTGCGG CCGCTGCCAG CGGCGGCCTC GGGCACGGGC
GGGCAGACTC TGGGCACGGT CACGGTCCGG GCCACGGCGC CGGCCAGTGC CACGACCGAG
GCATCGGACA GCTACGCGGC CAGCCTGGTC ACGGGCTACA AGGGGCTTCA GTCGGTGCGC
GACATCCCGC AGCCCGTGAC CGTGCTCACG CGCCAGTGGC TGGACGAGCA GGCCCTGCCC
GACCTGCATG CCGTGCTGCA GCACACGCCG GGCGTGACGG TGGAGTACAT CGACAGCGAG
CGCATCGCCT ATTACTCGCG CGGCTACCAG ATCGATTCGC TGCAGGTGGA CGGGCTCAAT
GTGAACCAGG TGGCCTCGGC CTCCACCTTC ATCCAGCCCG ATACGGCCAT GCTGGACCGC
GTGGAGGTGC TGCGCGGCGC CACGGGCCTG CTGCGTGGCG CGGGCTCGCC CTCGGCCATG
GTGAACATGG TGCGCAAGCG GCCCACGGCG CAATGGCAGG GCTCGGCCGC GCTGACGCTG
GGCTCCTGGG ACCGCCAGCG CATGGAGGCC GACCTGTCCG GCCCGCTGAA CGCAGCCGGC
ACGCTGCGCG GCCGGCTGGT GGCGCTGGCG GACGACAAGG CATCGTTCCA GACCGCGCGC
AAGGAAAAGC GCCTGGGCCT GTACGGCGTG CTGGAGGCGG ACCTGGGGCC GCGCACCACG
CTCACGGCCG GCCTGCAGCA CACGGACCTG CAGGCCACGG GCTCCTGGGG CGGCCTGCCC
GCCGCCGCCG ACGGCAGCCA GCTCGGCCTG CCGCGCAGCA CCTACCTGGG CACGCCCTGG
AATACCTGGG ACCGCCACAA CCAGCAGGCC TTTGCCGAGC TGGAGCACCG GCTGGACAGC
GGCTGGCAAC TGAAGGCCCA GGCGGCGCAC ACGCGGTTTC GGTCGGACGG GTTCAAGCAG
ACCTCGTTTT CCAGAGCCAG CGACAGCAAT CCCTACCTGT TCGACGTGAG CACCTCCATC
TATGGCGGCG ACGGCAGCAC GCAGAACGCG CTGAGCCTGC TGGCCAGCGG CCCCTTTGAG
GCCCTGGGCC GCAGGCACGA GCTGTCGCTG GGCGCCGACC TGCAGCGCAT CCGCAGCACG
GGCGCCACGG GCTACTGGGG CGTGAGCCCG CTGCGCAATG TGGACATCCG CGGCTGGAAT
CCGTACACCA GCTACCCCGA GCCGTTCTAC AGCGAGGGCA ACGGCAACGC CTATTCATCG
CCCGTGTCCC ACATCCACCA GTACGGCGGA TTCGCGCGGG CCCGGCTGTC GCTGACCGAC
TCGCTCACCG CCATTGCCGG CGCGCGCCTG AGCTGGTGGA GCTATCTCGA ACCCGGCAAT
GCCCAAAGCG GCCACAGCGT GCGCCGCGAG CTGACGCCCT ATGCGGGCCT GGTGCATGCG
CTGTCGGACA CGCTCGACGC CTATGCCAGC TACAGCGAGA TCTTCAGCCC CCAGGACAAG
AAGGCCGCCG ACGGCAGCAT CCTGGCGCCC GCCCGGGGCG AGGACCTGGA GGCCGGGCTC
AAGGGCAGTT TCATGGACGG CCGGCTGCAG GCCAGCGTGT CGGTGTTCCG CATCCAGCGC
GTGGGCAGCG CCATGCAGGA CACGGCATCG GCCATGCCCT GCCTGCCGTA CTACCCGACC
AGCCACTGCT TCATGGCCGG CGGCAAGAGC CGCAGCCAGG GCTGGGAGCT GGAGCTGTCC
GGCGAGCCAG CGCCAGGCTG GCAGGTGCTG GCCGGCTACA CCTACACCCA GGCCAGGTAC
CTGCGCGACG CCTCCGAGGC CAACGTGGGC CAGCCGCTGC GGCCCGTGGA GCCGCGCCAT
GCGCTGCGCC TGTTTGCCAG CCACCGCTTC AAGGGGCCCT TGCAGGGATG GACCGCAGGC
GCCGGCGTGC GGCTGCAAAG CGATGCCTAC GCCAGCGTGG GCGATGTCAC CACCCGCCAG
GGTGGCTATG CGCTTTTTGA CGCGCTGCTG GCCTACCGCC TGGATGACAC CTACTCGCTG
CAGCTGAACG TGAGCAACCT GCTGGACAAG CGCTACTACG CCAAGTTCTC GCCCAACAGC
ACCTACTTCA ACAACTACTA CGGCGATCCG CGCAACGTCA CGGTGTCGCT GCGCGCGCGC
TTCTAG
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| Protein sequence | MPRPLPHQPQ DGLAAARGWP ASMGMAGVAA VLGVAMLVAT AADCVHAAPS AQAGQAAQRS
FSIAAGPLTH VIAQYANQAG VALSFDAAQL GRLQSPGLQG SYGVEDGFAR LLQGTALQAV
RESSGVYTLR PLPAAASGTG GQTLGTVTVR ATAPASATTE ASDSYAASLV TGYKGLQSVR
DIPQPVTVLT RQWLDEQALP DLHAVLQHTP GVTVEYIDSE RIAYYSRGYQ IDSLQVDGLN
VNQVASASTF IQPDTAMLDR VEVLRGATGL LRGAGSPSAM VNMVRKRPTA QWQGSAALTL
GSWDRQRMEA DLSGPLNAAG TLRGRLVALA DDKASFQTAR KEKRLGLYGV LEADLGPRTT
LTAGLQHTDL QATGSWGGLP AAADGSQLGL PRSTYLGTPW NTWDRHNQQA FAELEHRLDS
GWQLKAQAAH TRFRSDGFKQ TSFSRASDSN PYLFDVSTSI YGGDGSTQNA LSLLASGPFE
ALGRRHELSL GADLQRIRST GATGYWGVSP LRNVDIRGWN PYTSYPEPFY SEGNGNAYSS
PVSHIHQYGG FARARLSLTD SLTAIAGARL SWWSYLEPGN AQSGHSVRRE LTPYAGLVHA
LSDTLDAYAS YSEIFSPQDK KAADGSILAP ARGEDLEAGL KGSFMDGRLQ ASVSVFRIQR
VGSAMQDTAS AMPCLPYYPT SHCFMAGGKS RSQGWELELS GEPAPGWQVL AGYTYTQARY
LRDASEANVG QPLRPVEPRH ALRLFASHRF KGPLQGWTAG AGVRLQSDAY ASVGDVTTRQ
GGYALFDALL AYRLDDTYSL QLNVSNLLDK RYYAKFSPNS TYFNNYYGDP RNVTVSLRAR
F
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