Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1588 |
Symbol | |
ID | 5747145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1782666 |
End bp | 1783826 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641296669 |
Product | ABC transporter related |
Protein accession | YP_001562617 |
Protein GI | 160897035 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCTGG CCCGCCAATG CAAATGCGAA TTCTATTCAT TTGCGCGGTT CTACAATCGC CGCATGTTTT TGACCGTCTC CCAACTCGAG GTGCGCTACC CGGGCCGCGA CAGGCCCGCC GTGCAGGGCG TCACGCTGAA TCTGGCCGCT GGCGACATCG GCGTGCTCAT CGGCCCCTCG GGCTGCGGCA AGACCACGCT GCTGCGTGCC GTGGCGGGCC TGGAGCCCGT GAGCGGCGGC GAGATCCGCA TCGACGGCCA GCTCGTGGGC AGCGCGGATT TCTCGCTCCC TCCCGAGCAG CGGCGCATCG GCATGGTGTT CCAGGACTAT GCGCTGTTCC CCCATCTGAA CGTGGGCCGC AACGTGGCCT TCGGCATCCA CCATCTTCCC AAGGCACGCC AGGCCGAGCG CGTGGCCGAG GTGCTGGAGC TGGTGGGCCT GGCCGGCAGT GCAGGGAGGT TTCCGCACGA GCTGTCGGGC GGCCAGCAGC AGCGCGTGGC GCTGGCCCGC GCGCTGGCGC CCAGCCCGCA GCTGATGCTG CTGGACGAGC CCTTCTCCAA CCTCGACGTG GACCTGCGCG AGCGCCTGGC GCATGAGGTG CGCGGCATCC TCAAGGCCGC AGGCGCCACG GCCCTGTTCG TCACGCACGA CCAGCTGGAG GCCTTTGCCA TTGGCGACAT GATCGGCGTG GTCCACCAGG GGCAGCTGCA GCAGTGGGAC GATGCCTATT CGCTGTACCA CCGCCCTGCC ACGCGCTTCG TGGCGGACTT CATCGGCCAC GGCGTCTTCG TGCCGGCCAC GCTGGCGCAG TCGGGGGCCG GCGGCGTGGT GGCGCGCACG GCGCTGGGCG ATCTGGTCGA TCCGGCCACC TGCCCGCTGC CTGCGCAGTT TCCGGGGGGC GAATGCGATG TGCTGCTGCG CGCCGACGAT GTGGTGCACG ACGATGCCTC GCCCGTGCAG GCACGCATCC TGCGCAAGGC GTTTCGCGGC TCGGAGTTCC TCTACACGCT GGAGCTGGCC AGCGGCCACA GCGTGATGGC CCATGTGCCC AGCCACCACG ACCATGCCGT GGGCGAGTGG GTGGGAATCC GGCTCGACAT GAATCACGTG GTCGCCTTCC CGCGAGAAAC ACAGGGCGCC CCGCAGTCCG CTGCAGCCTG A
|
Protein sequence | MPLARQCKCE FYSFARFYNR RMFLTVSQLE VRYPGRDRPA VQGVTLNLAA GDIGVLIGPS GCGKTTLLRA VAGLEPVSGG EIRIDGQLVG SADFSLPPEQ RRIGMVFQDY ALFPHLNVGR NVAFGIHHLP KARQAERVAE VLELVGLAGS AGRFPHELSG GQQQRVALAR ALAPSPQLML LDEPFSNLDV DLRERLAHEV RGILKAAGAT ALFVTHDQLE AFAIGDMIGV VHQGQLQQWD DAYSLYHRPA TRFVADFIGH GVFVPATLAQ SGAGGVVART ALGDLVDPAT CPLPAQFPGG ECDVLLRADD VVHDDASPVQ ARILRKAFRG SEFLYTLELA SGHSVMAHVP SHHDHAVGEW VGIRLDMNHV VAFPRETQGA PQSAAA
|
| |