Gene Daci_1264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1264 
Symbol 
ID5746819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1406899 
End bp1407858 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content69% 
IMG OID641296343 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001562293 
Protein GI160896711 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCT CCGCCCCAAC CAGCGATAGC GCCGCGCTGC CCCCCGGCAT GACCGTGCTG 
GAGCGCGGCT GGCTGTCGGC CAACAACATC GTCTTCGCCG CCGATGCCGA TGTCCCTGTG
GACGACGGCG CTGCCGTGGT CGATACCGGC TACGTCAGCC ATGCCGGGCA GACCGTGCTG
CTGGTCGAGC AGACGCTGGC CGGCCAACCG CTGGCACGCA TCCTCAACAC CCATCTGCAC
AGCGATCACT GCGGCGGCAA TGCTGCCTTG CAGGCGCACT GGCCGCAGGC CAGAACCTAC
GCCGCACCGG GCCAGGCCGC CTTCGTGCGC GACTGGAACC CCGCTGCACT GAGCTACACG
CCCACCGGCC AGGAATGCCC GCAATTTGCG CTGACCGGCG TGCTGCAGCC CGGCACCAGC
GTGCGGCTGT CGGGGCGCGA CTGGCAGATC CATGCCGCGC CCGGGCACGA TCCGCACTCC
ATCATCCTGT TCGAGCCCGC CAGCCGCACC CTGATCTCGG CCGACGCGCT CTGGGAAAAC
GGCTTCGGCG TGGTCTTCCC CGAGATCGAG GGCCTGAGCG CCTTCGACGA GGTGGCAGCC
ACGCTCGACG TGATCGAAGG CTTGGCACCG CTGACCATCG TCCCCGGCCA CGGTGGCGTT
TTCACGGGCG TCGCCGCCGC GCTGGACACG GCACGCCGCC GCCTGGACGG CTTTGTGCGC
GCCCCCGAGC GCCACGCGCT CTACGCGGCC AAGGTGCTGC TCAAGTACCG GCTGCTGGAC
TGGCAGCGCA TACGCACCAC CGATCTGCTG GCCTGGCTGG CCGCCACGCC CTACTTCGGC
ACACTGCACG CAGGCTATTT CTCTGACCAG CCCCCTGACG ATTGGGGCCG TGCGCTGGTG
GACATGCTCG TGCACTCCGG CGCGGCGCAG CGTGAGGGCG AGTGGCTGGT GAATGCCTGA
 
Protein sequence
MTTSAPTSDS AALPPGMTVL ERGWLSANNI VFAADADVPV DDGAAVVDTG YVSHAGQTVL 
LVEQTLAGQP LARILNTHLH SDHCGGNAAL QAHWPQARTY AAPGQAAFVR DWNPAALSYT
PTGQECPQFA LTGVLQPGTS VRLSGRDWQI HAAPGHDPHS IILFEPASRT LISADALWEN
GFGVVFPEIE GLSAFDEVAA TLDVIEGLAP LTIVPGHGGV FTGVAAALDT ARRRLDGFVR
APERHALYAA KVLLKYRLLD WQRIRTTDLL AWLAATPYFG TLHAGYFSDQ PPDDWGRALV
DMLVHSGAAQ REGEWLVNA