| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1248 |
|---|
| Symbol | |
|---|
| ID | 5746803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1391045 |
|---|
| End bp | 1391890 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641296327 |
|---|
| Product | fatty acid hydroxylase |
|---|
| Protein accession | YP_001562277 |
|---|
| Protein GI | 160896695 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3000] Sterol desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATGC TTACAGATTT CTTAAATGAT TTTAATAACG TACTATCTGC CCTGAAAGCA
TGGTGGCCCG TACTTGCTGT TGCCACATTT CTTGAAATCC TAAAACCTGG GAAGAAATCG
CATTGGCCCA CCATTCTCTC CAATATTATT TACCTACCAC TAGGCTTAGC CATCGGAGCT
ACGGCTCTCA GCTCCGTTAT TCCATTTTTG GAAGCTTATA TTCCAACAGA TATACTCCAA
GCCAGAAAAT GGGCTCACAC TCCAATCAGA CAAATCCTGC TATGGATTGC ATATATCGCA
TTTTTTGACT TCCTTTACTA CTGGCTACAT AGAGCACAGC ACCAGATTCC ATTTCTGTGG
CGCTACCACA TGGTGCATCA CTCGGATGTC AACACCTCAG CTACCACAGT AGGACGCCAT
CACTGGCTTG AAGAGGGTTT TCGATTTTTC ATCATCACTG CTCCGCTGAT ATTCCTGATG
GGAGGTACCA AGAATATGCC ATTGTGGGTC GCCATATTAA TGTCACTCAA TGGAATATTC
ATGCACTGGA ATGTATCTTT CAGATTCGGA ATACTGGAAA AAATCATTAT CACACCTGCA
TACCACAGAA TCCACCACTC GATTGAAGAG CATCACTACG ATAGAAATTT TGGCGTCTTC
ACTCAGATGT GGGATCGTAT TTTCCTCACA CGCCACCTTC CTAGCCCAGA AGAGTTTCCA
GTCACCGGAA TTTCCGGCCT ATCCCACATC CGTAGCTGGG CGTTGCTGCT TCCATGGCCC
ATAGTTCTTA GTGAGCGAAA ATCTATTCCT CGAGAAGCAG CAAAACCTCA TGAAGCGATT
GACTAA
|
|---|
| Protein sequence | MDMLTDFLND FNNVLSALKA WWPVLAVATF LEILKPGKKS HWPTILSNII YLPLGLAIGA
TALSSVIPFL EAYIPTDILQ ARKWAHTPIR QILLWIAYIA FFDFLYYWLH RAQHQIPFLW
RYHMVHHSDV NTSATTVGRH HWLEEGFRFF IITAPLIFLM GGTKNMPLWV AILMSLNGIF
MHWNVSFRFG ILEKIIITPA YHRIHHSIEE HHYDRNFGVF TQMWDRIFLT RHLPSPEEFP
VTGISGLSHI RSWALLLPWP IVLSERKSIP REAAKPHEAI D
|
|---|
| |