Gene Daci_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0916 
Symbol 
ID5746470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1027437 
End bp1028456 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content71% 
IMG OID641295996 
ProductLysR family transcriptional regulator 
Protein accessionYP_001561947 
Protein GI160896365 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0349962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATGCA TGAGACAAAT CGATGGATCG CAGCTCGATG GCAGGCTGCT GCAACTGCTG 
CTGGCCGTGC TGGAGACCGG CAGCGTCACG GCGGCGGCGC AGCGCCTGGG CGTGACGCAA
TCGGCCGTCA GCCATCTGCT GGACAAGCTG CGCGCCATCA CGGGCGACCG ATTGTTCGTC
CGGCAGGGGC GGGGCATTGC ACCCACGGCC CATGCGCTGG CGCTGCAGGA CCCGGCGCGC
GAGCTGCTGC GGCAGATGCA GCAGTTCGGC CAGGGGCCCA GCTTTGACCC CGCGCACTGG
CGTGCCGAGA TCACCATTGC CGCCAACGAC CTGCAGCGCG AGTTGCTGCT GCCCGCGCTG
GCCCGGCGCC TGCGCACGCA AGCGCCCGCA GCCATGCTGC GCGTGATCGA CAGCGGCGCG
CCGGATGCCG AACTGCTGCG CTCGGATGCC TGCCTGCTGG CCATCAGCCC GCGCCCGCCC
GATGCCACGG ACATCGTGCA AAAGCGCCTG TTCACCGATG AGTACGCAGT CTTCTATGAC
AGCGCCGTGC GACAGCCGCC GGCCAGCCTG GCCGACTATC TGCAGGCCGA GCACGCCACC
GTGGCCTATG CCGACCGCCA AGCGCTGGAC CTGGACCTGC AACTGCAGGC GCGCGGGCTG
GAGCGCCGCT TTGCCGTGCG CGTGCCGGGC TTTGCGGCGC TGGCCGCCTT CGTGCGCGGC
ACGCCGCTGC TGGCGACGGC GCCGTCGCTG CTGGGCCGCA CGGCCCTGTC ATCGCTGGGC
AGCTTTGTCG TGCCCGTGGA CTGCCCGCCG CTGCCCATGT TCATGATCTG GCATACGCGC
CACCAGGCCG ATCCAGCCCA TGCGTGGCTG CGCGGGCAGT TGCAGCAGGT GGTGGCGCAG
GCGCTTGGAG GCGCCGGGCC GTCAATGCCT GCGAAGCAAG GCGCGGCGCA ACAGGCGTGC
TGCGCGGTTG CGGATCTGGA AGGGGCTGTG GCTCACGGCC GGGCTCACGC GGGCGCGTGA
 
Protein sequence
MECMRQIDGS QLDGRLLQLL LAVLETGSVT AAAQRLGVTQ SAVSHLLDKL RAITGDRLFV 
RQGRGIAPTA HALALQDPAR ELLRQMQQFG QGPSFDPAHW RAEITIAAND LQRELLLPAL
ARRLRTQAPA AMLRVIDSGA PDAELLRSDA CLLAISPRPP DATDIVQKRL FTDEYAVFYD
SAVRQPPASL ADYLQAEHAT VAYADRQALD LDLQLQARGL ERRFAVRVPG FAALAAFVRG
TPLLATAPSL LGRTALSSLG SFVVPVDCPP LPMFMIWHTR HQADPAHAWL RGQLQQVVAQ
ALGGAGPSMP AKQGAAQQAC CAVADLEGAV AHGRAHAGA