Gene DET1539 details

Gene Information

• Locus tag: DET1539
• ID: 3229186
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 1388437
• End bp: 1389615
• Gene Length: 1179 bp
• Protein Length: 392 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637121097
• Product: sensory box sensor histidine kinase
• Protein accession: YP_182237
• Protein GI: 57233723
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2205] Osmosensitive K+ channel histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAAACAG ACGAACTTAA AGAAGAACTG GCCCGGTTAA AACAATGTAA TTACACTCTG 
AAAAAAGAGC GTCTGAAATA CCGCGAACTT TTCAACCGCG CTAATGACGC CATACTGCTG 
TTCAAGTTTA ATAGCCCCAA TGAGCCGGTA ACTATTACCG AAGCCAATAC CGCCGCCTGC 
AAGCACTTCG GCTATACGTA CGAAGAACTG ATAGGCAAAA CAAACCTGTT TATTGATTCC 
CCCGAAACAG CAATCCGGGG GACGGAAATA CTGAGTGACC TGTTTGAAAA AGGGCATGAA 
GTGCTGGAAA TAGCCCACAA GAATAAAAAC GGCGAGAGTA TCCCGGTTGA GATTAACCAT 
AAATTGATTT ATCTGGCCGG TGATACCATG GTTATTTCGG TTATCCGGGA TATAACTGCC 
CGAAAGAAAA ATGAGCAGGA ACTGCGGGAG TCTTTAGAGC GGGAGAAACA GCTCCGGGAA 
ACACTGGAAA ATGAAATAAG CCAGCGGGTA ACCTTTATGA GAGCTTTGGT TCATGAACTG 
AAAACCCCTC TGACCTCCAT GCTGGCTACA TCTGAACTGC TGAGCAAGAA CCTGAAGGAA 
GAACCCAACC AGAGTTATAT GAAATGCCTG TATGCGGGCA TCCAAGACCT TAATCTGCGG 
ATTGACGAGC TGCTGGATAT TGCCAGGGGA GAAATAGGGC TGCTAAGGCT GGAATGTGAA 
CCGCTGAATA TTTATGAACT GCTTAAAGAC GTAAATGAAA TAATGAAACC CGTATTTGAA 
TCAAACGCCC AAAAGCTGAC TATAAATATC CAAAACCCGC TGCCTATTAT GATTGCGGAT 
TATAAACGTC TCAAGCAGGT TATCTTAAAT TTGCTGGATA ATGCGGCTAA ATACACTAAT 
GTTGGCGGAG ATATCCGGCT TTGTGCCTCA ACTGATGATA AGTATTTGAT AATTGAGGTC 
AGGGATAACG GCAAAGGCAT GAGCCTCAAG GAAACAAGTA ATTTGTTTAA GCTATATTCA 
CGCAGCCATA AAAAAGGCTC TCCTTCAGGC CTAGGGATAG GCCTGGCTTT ATCCAAGATG 
ATTATTGACC TGCACCAGGG TGAAATAAGA GTGAAAAGCA AACTTGGGGA AGGCAGCACC 
TTTACTTTTT CCATACCGCT GAGGCCGGAA GCCCCATGA 

 

Protein sequence

METDELKEEL ARLKQCNYTL KKERLKYREL FNRANDAILL FKFNSPNEPV TITEANTAAC 
KHFGYTYEEL IGKTNLFIDS PETAIRGTEI LSDLFEKGHE VLEIAHKNKN GESIPVEINH 
KLIYLAGDTM VISVIRDITA RKKNEQELRE SLEREKQLRE TLENEISQRV TFMRALVHEL 
KTPLTSMLAT SELLSKNLKE EPNQSYMKCL YAGIQDLNLR IDELLDIARG EIGLLRLECE 
PLNIYELLKD VNEIMKPVFE SNAQKLTINI QNPLPIMIAD YKRLKQVILN LLDNAAKYTN 
VGGDIRLCAS TDDKYLIIEV RDNGKGMSLK ETSNLFKLYS RSHKKGSPSG LGIGLALSKM 
IIDLHQGEIR VKSKLGEGST FTFSIPLRPE AP