Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1100 |
Symbol | |
ID | 3229604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 1001731 |
End bp | 1003719 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637120664 |
Product | family A DNA-dependent DNA polymerase |
Protein accession | YP_181815 |
Protein GI | 57234138 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0506694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAACA TCAGTATAGA TATAGAAACC TTCTCCGACA TCGACCTGAA TAAGTGCGGC GTTTACAAAT ACGCGGAGTC TCCGAACTTT GAAATTCTGC TTTTCGGTTA TGCGGTCGAT GGCGGCAAGG TGCAGGTCAT TGACCTTGCA CAGGGAGAAC ATATCCCGCA GGAAATCATC GATGCCCTGA CAGACGATGA GGTGACAAAA TGGGCTTTCA ATGCGAACTT TGAACGAGTC TGCCTGTCCC GGTATCTTTC CGATCTTGGC GTGAGCCTTG ATCCCTTCCA TGATAACCAC CCTCTCTCCA CGGAGTGCGC CCGGTTTCTG AATCCGGAAG GCTGGCGCTG CTCTATGGTC TGGGCAGCCA CGATGGGACT GCCGCTTTCA TTAAAAGGCG TCGGTCAGGT GTTAAAGCTC GAAGATCAAA AGATGGACGA GGGCAAGGCG CTCATCAAAT ACTTCTCCGT GCCTTGCGCT CCTACCAAAG CCAACGGAGG CCGCACCCGG AACATGCCCT TCCATGATCC TGAAAAGTGG GAAACCTTCA AAGCATATAA CAAGCGGGAC GTCGAGGTCG AGATGGCGAT TCAGCAGCGC CTTACGAATT TCCCGGTACC GGACTTCGTC TGGGATGAAT ATCGAATCGA TCAGGAAATC AACGACCGTG GCGTGCGCCT TGATATGGAT CTGGTGGCAA AGGCAATCGA GATGGACACC CGCTCCCGGA CAGAACTGAC CACGGCCATG AAGGATATTA CGGAGCTCGA CAATCCCAAC TCCGTCCAGC AAATGAAGCA GTGGCTCTCT GACAACGGCC TCGAAACCGA CAGTCTTGGA AAGAAGGTCG TGGCCGAACT CATAAAGACC GCTCCCTCTG AACTTCAGAC TGTTCTGGAG CTCCGCCAGC AGCTTGCCAA ATCCTCCGTC AAGAAATATC AGACGATGGA ACGGGCGGTC TGCGATGATG GCCGGGCTCG CGGCATGTTC ATGTTTTACG GAGCCAACCG CACCGGTCGA TGGGCAGGCA GGCTGATCCA ATTGCAAAAC CTCCCTCAGA ACCATCTGGA GGATCTGGCC GATGCCCGCG CCCTTGTTAA ATCCGGAGAC TTCGATGCCG TGAAGCTCCT GTACGAAGAT GTGCCGGACA CGCTCTCGCA GCTTATCCGG ACAGCATTTA TTCCGAAGGA CGGCACGCAG CTTTATGTTT CGGACTTTTC TGCCATCGAA GCCCGCGTGA TCGCTTGGTA TGCCGGTGAG ATGTGGCGGC AGAAGGTCTT TGCAGACGGC GGCGACATAT ACTGCGCCAG CGCGTCCCAG ATGTTTCATG TCCCGGTTGA GAAGCACGGC GTCAACGGCC ACCTGCGGCA AAAAGGTAAG ATCGCAGAAC TCGCGCTCGG CTACGGCGGC TCGGTCGGTG CATTAAAGGC GATGGGTGCT ATCGAGATGG GCTTGTCCGA AGACGAGCTT CCTCCGCTGG TGGATGCTTG GCGGCAGACC AATCCGCACA TCGTAAAATT CTGGTGGGAT GTCGACCGGG CGGTCATGGA GGCCGTAAAG CATAAGCACA CGACCTCGTC CTACGGGCTG ACCTTTTCCT GCCGCTCCGG GATGCTCTTT ATCACGCTGC CATCCGGCAG AAACCTCGCC TATGTAAAGC CCAAGGTCGG CACAAACAAG TTCGGCGGCG AGTGTATCAC CTATGAAGGC GTCGGAGCCA CGAAAAAGTG GGAACGGCTC GACTCATACG GCCCGAAATT TGTGGAAAAC ATCGTGCAGG CGACCAGCCG TGACATTCTC TGCTATGCCA TGAAGACGCT TAGGAACTGC GAAATCGTCA TGCATATCCA CGACGAGCTG GTCATTGAGG CTGATCCTCA CATGTCCCTT GATGTTCTCT GTGAGCAGAT GGGCAGGACA CCGCCGTGGG CTCGCGGCTT GCAGCTTAGG GCAGACGGGT ACACCACGCC CTTCTACAAA AAAGATTAA
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Protein sequence | MKNISIDIET FSDIDLNKCG VYKYAESPNF EILLFGYAVD GGKVQVIDLA QGEHIPQEII DALTDDEVTK WAFNANFERV CLSRYLSDLG VSLDPFHDNH PLSTECARFL NPEGWRCSMV WAATMGLPLS LKGVGQVLKL EDQKMDEGKA LIKYFSVPCA PTKANGGRTR NMPFHDPEKW ETFKAYNKRD VEVEMAIQQR LTNFPVPDFV WDEYRIDQEI NDRGVRLDMD LVAKAIEMDT RSRTELTTAM KDITELDNPN SVQQMKQWLS DNGLETDSLG KKVVAELIKT APSELQTVLE LRQQLAKSSV KKYQTMERAV CDDGRARGMF MFYGANRTGR WAGRLIQLQN LPQNHLEDLA DARALVKSGD FDAVKLLYED VPDTLSQLIR TAFIPKDGTQ LYVSDFSAIE ARVIAWYAGE MWRQKVFADG GDIYCASASQ MFHVPVEKHG VNGHLRQKGK IAELALGYGG SVGALKAMGA IEMGLSEDEL PPLVDAWRQT NPHIVKFWWD VDRAVMEAVK HKHTTSSYGL TFSCRSGMLF ITLPSGRNLA YVKPKVGTNK FGGECITYEG VGATKKWERL DSYGPKFVEN IVQATSRDIL CYAMKTLRNC EIVMHIHDEL VIEADPHMSL DVLCEQMGRT PPWARGLQLR ADGYTTPFYK KD
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