Gene Cyan8802_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1242 
Symbol 
ID8390553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1261285 
End bp1261890 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content47% 
IMG OID644979251 
ProductExopolysaccharide synthesis ExoD 
Protein accessionYP_003137002 
Protein GI257059114 
COG category[R] General function prediction only 
COG ID[COG3932] Uncharacterized ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.345513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTCAC GATTTTCTGA AGATATCGAA GCGTTACTCG AACGATTAAT GGTTCATCCC 
CTAACCCTCA GAGAAATTCT CTTAGAAACC TCTGAACGGG GATTTTGCCT CACCATTAGT
TTACTGGTAT TGCCCTTTCT CTTTCCGATG CCCCCAGGAT TCACCACCAT TTTAGGCGGC
GGAACCCTGC TGCTCTCCCT ACAAATGGCC CTAGGACGGC GATCGCCTTG GTTGCCCAAA
CGAGTCGGGA AATTTACCTT CCCTCCGCGT TTTAGCCAAG AATTGCTGAA AAATGTCAAA
AAATTGAGTA AGCTGCTGGA AAAAGTCTGT CGTCCTCGCT GGTTTTCCAT TGCTAAACAT
CCCTTTGTCT GGCGAGGTAA TGGACTGTGT ATGGCCTGGT TAGCCATTTT GTTGATGTTA
CCCATCCCCT TGACCAATCC AGTTCCCACC GTAGCCATTT TAGTCTTAGC CATAGCCACC
TTAGAAGGGG ATGGATTGCT CATCTGTTGC GGGTATGGAC TGACCCTTCT CAATACCCTA
TTTTTTGGTT CCATCGGTTA TTTGCTTTGG CAAGCCCCCC AATATCTCCC TCAGATGTTT
AGATAG
 
Protein sequence
MHSRFSEDIE ALLERLMVHP LTLREILLET SERGFCLTIS LLVLPFLFPM PPGFTTILGG 
GTLLLSLQMA LGRRSPWLPK RVGKFTFPPR FSQELLKNVK KLSKLLEKVC RPRWFSIAKH
PFVWRGNGLC MAWLAILLML PIPLTNPVPT VAILVLAIAT LEGDGLLICC GYGLTLLNTL
FFGSIGYLLW QAPQYLPQMF R