| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3962 |
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| Symbol | |
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| ID | 7289908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | - |
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| Start bp | 3986187 |
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| End bp | 3989156 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643586933 |
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| Product | Polyprenyl synthetase |
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| Protein accession | YP_002484638 |
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| Protein GI | 220909327 |
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| COG category | [H] Coenzyme transport and metabolism
[S] Function unknown |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase
[COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.190104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.617204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGC GAGTTGCCAT TTTGGGTGGT GGAGTGGCAG GTATGAGCGC TGCCCACGAA
CTGGTTGAAC GTGGGTTTAA TGTCGTTGTA TACGAAGCAA ACCCGTTACC CGGTGGCAAA
GCTCGAAGCA TGCCTGTCCC CAATTCTGGG ATTGCTGGGA AAATGGACCT GCCGGGTGAA
CACGGATTTC GCTTTTTTCC CGGTTTCTAC CGTCATCTTC CCGATACGAT GAAGCGCATT
CCCTTCAAAA ACCAACCGCA GGGGGTCTTT GATAACCTTG TTCACACCAA ACAAACCCTT
GGTATATCGA CAAATAAAGG ACACTGGATT GCGCCGAATT CTTTCCCAAC TTCTCTGGAA
GACTTGACAG TAGCTTTTGA TTTGCTGTCA CAAATGCTGA TCGGCAATGG ACTTAACATC
CCCAGAAAAG AATCCTGGCA TTTGCTGGAA AGACTTCTAG TATTCTTGAC CAGTTGTGAG
GAGCGCCGCC TGGCAGAATA TGAGTACATT CCCTGGTGGG ATTTTGTAGA TGCTAAAAAT
TGTTCCCCTG AGTTTCAACA ATATATTGTT TCAGGGTTAA CCAAGTCTTT AGTGGCTTGT
CGGGCCCAGG ACATCAGTAC CCGAACTGGC GGTGCTACGG TTGCCCAGTT ATTTCTAGAT
ATCTTTCGCG ACTGTAGCGA TCGCGTCCTC AACGCTCCGA CCAATGAAGC CTGGTTAACT
CCATGGTACG AGTACCTAAC CCAGTCAGGG GTGGATTATC GCCTGAATGC CAGAGTCGAA
CACATCTCCT GTAGGGGCCA ACGGATCACT GGAGTGACAA TCGTTGAGGC TGGAACCCGG
TATGAAATTG AGGCCGATTA TTATATTGCC GCTGTTCCGG TTGAAGTCAT GCTTCGGCTG
CTGACAGAAC CCCTGGTGCA GGCAGAACCC AGACTTGGCT TATTGAGTAA ACTGCGGACT
GAATGGATGT CGGGCATCCA ATTTTATCTC GATCGTCCGA TCACCATGAA TCATGGCCAT
ACCATTTATT TAGATTCACC CTGGGCTTTA ACCTCTGTTT CCCAGGCTCA GTTCTGGTCA
GATTTTAATC TGCAAGAATA TGGCGATGGC AATGTTCAGA GTATTATTTC TCTGTGCATA
TCGGATTGGA ACTCTCCAGG TATTTTATAC AATAAACCTG CAACTCAGTG TACGCTGGAA
GAGATTAAAA CAGAAGTTTG GCAACAGATG ATCAGCCATT TTTCTGGAGA TATTAGGCAA
GATTTGGAAG CAGCTAAGCT GATCAATTGG TTCTTTGATC CAGCGATTGT TTATCCTAAT
CCTTCTGAAG TAGCTAATCT TGAACCTCTA TTAATTAATA CAGCGGGTTC ATGGGAACAT
CGCCCCGATG CTGTCACAAG TATTGAAAAT CTCTTCCTCT CATCTGATTA TGTACGTTGC
TATACCGATC TGGCCACGAT GGAGGGGGCA AACGAAACCG CACGGCGGGC CGTCAATGGT
ATCCTCACAG CTTCTGGTTC GACAGCAACT CCCTGTGCGG TCTGGCCCTA TCAAGAACCG
GAATTTTTAG CCCCATTTAA AGCGTACGAT CGCCTCCGCT TTGGTGCCGG TTTACCTCAC
CAACTCCCCC CCCTGGGTAA GATTGGCTCC CAAGCCATTC AACTGCTCAA AAAGGGGATG
GAGAAATTAC CAGTCTGGTC AGAAGCTTTA GTGGATGAAC TGCAGCAACG CCAGATGGAT
CAGCAGTTGG CTGGGTTGGA ATGGAAACTC GGTTCCCTCT GGTCTACCCT GCGCTATGCC
TGGTCAACGT CTGGTGTGCA GATTAAACGG CCAGGAACTA CCTCAAACGG GACTCAAACT
CAAACGCCCC ATGATGAGAC AAATGGCTTC TCGGTTCCCA GCCAGGAGGA TGTAAAGTTT
AAAGATTTTG CCAGTCTGAA AATTTTAGAG CGGGTGAGCG CTAAACATGA GTTAAAGGGT
TTGGCTTTAG AGATGCGGAC CCTACGAGTC CTGCTGGAAG ATGGCATGTC TGTACTCGAT
CAAAATTTCC AGCTTGATCA AACCGTTGCT GATCCTGCTT TAGTCCAACA GGTTGTCAGA
CAAATTCTTT CCCTACCCGG CAAGCGGATT CGTGCTCTTT GTGTATATCT ATCAGCCTGT
GTTGGGCGGC GCAGTTATCC CCAAGCGGCG GAAAACATTG CCCTTGCCGT TGAACTGGTT
CATGCCGCCT CTCTACTCCA TGACGATGTG ATTGATCTAG CTCCTCAGCG TCGTCATCAA
CCCTCCTCAA ACATGGTCTA TGGGAATGCA GCCAGTATCC TGGGTGGCAA TTTTTTAGTG
GTTCAGGCAG CCCAATTACT GTTGAATACG GGCCGTCCTG GCTTAGCGGC TGATCTGCTG
CGGGCGGTTG AAGCGATGAT TCTTTCGGAG TCAGAACAAC TGGAAAACCG TGGTCAAGTG
ATCCTGAATC CAGAACAATA TCTGAACATC ATTCGAGGAA AAACGGCGAC GCTATTCAGG
TGGGGATGCC AGGCGGGTGC ATCGATCAGT AATCATCCTG CTGCTGTGGT TGAAGCACTG
GCCCGATATG GAGAAAACCT GGGGATGGCG TTTCAGCTCA TCGATGATTT ACTGGATGTC
ATCGGTGAAG GAACACTGCT GGGTAAGGAT CTCTATCGGG ATCTGGCGGA CGGAGTGATC
ACCTATCCAT TCCTGGTTGC CACCCAAGAG AACCCTAAAA TTTGTTCAGA GTTAAAGATG
GCTTTGAGCA ACCCAGAGCA TTTGCAGTCT GCCTCAACCC AGTTAAAAAT TAAAGAACTG
GTGATGCAAA CCCAGGCGAT CGCTGAAACT CGTGCCCTGG CAGCGGCTTA TATTGAGCAA
GCACAAGCTG AACTGGACCG CGTTCCCTGG GGGCCTGCCC GAGATACGCT GAATGCATTA
GCTGAAGTTT CTCTAGAGCG CTTATTCTAA
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| Protein sequence | MAKRVAILGG GVAGMSAAHE LVERGFNVVV YEANPLPGGK ARSMPVPNSG IAGKMDLPGE
HGFRFFPGFY RHLPDTMKRI PFKNQPQGVF DNLVHTKQTL GISTNKGHWI APNSFPTSLE
DLTVAFDLLS QMLIGNGLNI PRKESWHLLE RLLVFLTSCE ERRLAEYEYI PWWDFVDAKN
CSPEFQQYIV SGLTKSLVAC RAQDISTRTG GATVAQLFLD IFRDCSDRVL NAPTNEAWLT
PWYEYLTQSG VDYRLNARVE HISCRGQRIT GVTIVEAGTR YEIEADYYIA AVPVEVMLRL
LTEPLVQAEP RLGLLSKLRT EWMSGIQFYL DRPITMNHGH TIYLDSPWAL TSVSQAQFWS
DFNLQEYGDG NVQSIISLCI SDWNSPGILY NKPATQCTLE EIKTEVWQQM ISHFSGDIRQ
DLEAAKLINW FFDPAIVYPN PSEVANLEPL LINTAGSWEH RPDAVTSIEN LFLSSDYVRC
YTDLATMEGA NETARRAVNG ILTASGSTAT PCAVWPYQEP EFLAPFKAYD RLRFGAGLPH
QLPPLGKIGS QAIQLLKKGM EKLPVWSEAL VDELQQRQMD QQLAGLEWKL GSLWSTLRYA
WSTSGVQIKR PGTTSNGTQT QTPHDETNGF SVPSQEDVKF KDFASLKILE RVSAKHELKG
LALEMRTLRV LLEDGMSVLD QNFQLDQTVA DPALVQQVVR QILSLPGKRI RALCVYLSAC
VGRRSYPQAA ENIALAVELV HAASLLHDDV IDLAPQRRHQ PSSNMVYGNA ASILGGNFLV
VQAAQLLLNT GRPGLAADLL RAVEAMILSE SEQLENRGQV ILNPEQYLNI IRGKTATLFR
WGCQAGASIS NHPAAVVEAL ARYGENLGMA FQLIDDLLDV IGEGTLLGKD LYRDLADGVI
TYPFLVATQE NPKICSELKM ALSNPEHLQS ASTQLKIKEL VMQTQAIAET RALAAAYIEQ
AQAELDRVPW GPARDTLNAL AEVSLERLF
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