| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3173 |
|---|
| Symbol | |
|---|
| ID | 7289109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 3143912 |
|---|
| End bp | 3144637 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643586149 |
|---|
| Product | 4-vinyl reductase 4VR |
|---|
| Protein accession | YP_002483862 |
|---|
| Protein GI | 220908551 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1719] Predicted hydrocarbon binding protein (contains V4R domain) |
|---|
| TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0115584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATGA CTCAAGCCCA ACCCACGGTA AAGCCGCCTT CTACCTGGCA AAAAGTCGAG
CATTCTTTGC GAAAGAAATA TCCCAAAATG CATCACCACT ATGCGGCTGA GGATTTTTTC
TGTTTTCAAC CCGATCTGGG TCAAATCACC GACTGGAATC ACGGTCGTAA TGTTCTCACC
AGTGAGGATT TTGTTGTTGG CTTAATTGAG GGATTGGAAG AAGAAGTTGG CAGTGCCGCC
CCAGTCGTGA TGTATAAGAT TGGCGAGGAA TGGGGCAGCC GGGATGCCAA TTTTTTCCAG
ACCTGGTTTG AGCAGGAATA TCAGTATGAG CAGCCCCTGC GTCAACTCAA ACTTCCCTAC
GTTCTGGAGG CCTGGTGGTG GCCCTTTACC GCCCAGGGCT GGGGCAACTG GGAAGTGGAT
CTGAGCGATC AGAAAAACGG TTTCATGTTT ATTAATATTT TTGATTCTGT CGTTGCCCGT
ACCCTGGGGG ATGTGGGTAA GCCAGTTTGC TATCTCTACG CCGGGATGTT CGCTGGATTT
TTCTCCGGGT TGGTACAGAA ACCCCTGGGT TGCATCGAGA TTCAATGCTA TGCGATGGGA
GAAACCTATT GTAAGTTTCT GCTGGGCAAG CGCGATCGCC TGGATGCAGC GACCTTCTGG
CAAAATGAGG GGGCGACATC GCGGGATATT GAAAAGCGGT TACGCAACGG AGAATACCTG
TCATGA
|
|---|
| Protein sequence | MTMTQAQPTV KPPSTWQKVE HSLRKKYPKM HHHYAAEDFF CFQPDLGQIT DWNHGRNVLT
SEDFVVGLIE GLEEEVGSAA PVVMYKIGEE WGSRDANFFQ TWFEQEYQYE QPLRQLKLPY
VLEAWWWPFT AQGWGNWEVD LSDQKNGFMF INIFDSVVAR TLGDVGKPVC YLYAGMFAGF
FSGLVQKPLG CIEIQCYAMG ETYCKFLLGK RDRLDAATFW QNEGATSRDI EKRLRNGEYL
S
|
|---|
| |