| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1628 |
|---|
| Symbol | |
|---|
| ID | 7287551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 1476386 |
|---|
| End bp | 1476883 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643584628 |
|---|
| Product | Orange carotenoid protein |
|---|
| Protein accession | YP_002482359 |
|---|
| Protein GI | 220907048 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.052662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTTA CTGCTGATTC GTTTACTTTC ACCAATCAAC TGAACAACGC AGTTCAGGAC
ACGATCGCTC TCTACAACTG CCTCAGTGTG GACGATAAGC TGGGATTGCT CTGGTTCCTC
TACACTGAAG CCGGCCGCTC CATTACCCCT GCTGCTCCCG GAGCCGCCCG CCTACAACTG
GCTGAAGGTT TATTAGAGCA AATCAAATCC ATGTCCCATG ACCAGCAACT CCAAGTCATG
CGCGATCTGG TGGCTAAAGT GGGAACGCCC CTGACCCGTG CCTACAGCGT TCTCAGTGCC
AATACCAAAC TCGCTTTCTG GTATCAACTG GCGGAATGGA TGGTCCAGGG TACCGTGGTT
CCAGTTCCAG CGGATTACAA GCTCTCTAGA GATGCCGATC GGGTGCTTAA CGCGATCAAA
CAACTGGACT TTGGTCAACA GATCACCGTT CTGCGCACGG CTGCGGTCAA TATGGGTGTG
GATGCCCTGG CTGCTTAA
|
|---|
| Protein sequence | MTFTADSFTF TNQLNNAVQD TIALYNCLSV DDKLGLLWFL YTEAGRSITP AAPGAARLQL
AEGLLEQIKS MSHDQQLQVM RDLVAKVGTP LTRAYSVLSA NTKLAFWYQL AEWMVQGTVV
PVPADYKLSR DADRVLNAIK QLDFGQQITV LRTAAVNMGV DALAA
|
|---|
| |