Gene Cwoe_3970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_3970 
Symbol 
ID8734428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp4211027 
End bp4212304 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content71% 
IMG OID646504595 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_003395762 
Protein GI284045422 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGTTGA TCGCGCTGGT AACCGGCGCT GCGCTGCTGA CCGCCGGCTG CGGCGGAAGC 
AGCAGCAGCG GCGGGAAGGA CGGCTCGCTC GATCTCGTGA TCGGCGACTC CGCACCGCTC
AGCGGCGATC TCGCCGACTT CGGCCCGCCG ACGCAGAAGG CCGCCGATCT GGCGATGGCG
CAGATCGACG CGGCGATCGA GAGAGCGGGC GTCGACCACA ACGTGTCGCT CGTCCACGAG
GACAACTGCG GCGGCTCGGA CCAGCAGTGC GCCGTGCAGG CGACGCGCAA GCTCGCCACG
TCGGACAAGT CGACCTGCAT CGCCGGACCG TGGGCGTCCT CTGACGTCGT CCCGGCGGCG
GAGTCGGTCG CGATCCCGGA GGAGGTCGTG CTGATGCTGC CGGCGTCGAC GGGCGCCGCG
ATCACGGACC TGAAGGACGG GCCCGGCTTC GTCAACCGCA CGGCCTACCG CGACTCGTTC
CAGGGCTCGG CGCTCGCCAA CTACGTCGCC AAGGCGCTCG GCGGCGCCGC CGGCAAGACG
GTCAACATCG GCGCGCGCAA CGACGCGTAT GGCACGGGCC TCGCCGAGAC GTTCCAGGCC
GCGTGGGAGA AGCTCGGCGG CAAGGTCGGC GAGAAGGTCG TCTACGACGT CGATCTGGCG
TCCTACGACA CCGAGGCCGA GCGGATCACG TCCGGCGACC CGGACGGCAC GGTCATCCTC
GACTTCCCCG AGACCTACAA CAAGGTCGGG CCCGCGCTGG CACGGACGGG GAAGCTCGAC
GTCGCGACGA CGTTCATGCC CGACGGGATG AGCGCGCCCG CCGTCATCAA GAGCGCCGGC
GCGAACGCGA CGGTCGGCAT CCGCGGGACG GTCCCGGGCC TGCCGAAGGG CGACCCGGGC
TACGTCGCCT TCGACAAGGC CTACAGAGCG GCGGCTCCGA AGGACGTCGC CCGGCAGGCC
TACGACGCGC AGGCGTTCGA CTCAGTGATG CTCTGCTACC TGGCGGCGGC GGCCGCCAGA
TCGAGCGACG GCCCGGACAT CGCGGAGCAC ATCCGCGCGG TCAGCGGCCC GCCCGGCAAG
AAGTACGGCT GGCTCGACCT CGCCGAGGCG ATCGAGGCGC TGCAGCGCGG CGAGGAGATC
GACTACCAGG GCGTCTCCGG CCCGATCGAC CTCGACGACA ACGGCGACCC GTCCGCCGGC
ATATTCGACA TCTTCCGGTT CGAGCGTGAC GGAACCATGG AGATCGTCGA CCAGATCCCG
GTGGAGGCGC CGAGCTGA
 
Protein sequence
MLLIALVTGA ALLTAGCGGS SSSGGKDGSL DLVIGDSAPL SGDLADFGPP TQKAADLAMA 
QIDAAIERAG VDHNVSLVHE DNCGGSDQQC AVQATRKLAT SDKSTCIAGP WASSDVVPAA
ESVAIPEEVV LMLPASTGAA ITDLKDGPGF VNRTAYRDSF QGSALANYVA KALGGAAGKT
VNIGARNDAY GTGLAETFQA AWEKLGGKVG EKVVYDVDLA SYDTEAERIT SGDPDGTVIL
DFPETYNKVG PALARTGKLD VATTFMPDGM SAPAVIKSAG ANATVGIRGT VPGLPKGDPG
YVAFDKAYRA AAPKDVARQA YDAQAFDSVM LCYLAAAAAR SSDGPDIAEH IRAVSGPPGK
KYGWLDLAEA IEALQRGEEI DYQGVSGPID LDDNGDPSAG IFDIFRFERD GTMEIVDQIP
VEAPS