| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3161 |
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| Symbol | |
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| ID | 4809611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3735044 |
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| End bp | 3735778 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640108594 |
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| Product | ribosomal small subunit pseudouridine synthase A |
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| Protein accession | YP_001039549 |
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| Protein GI | 125975639 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGAGATA CGCAGAGAAT AGACAAGATA CTTTCAAATT CCGGGTTTGG CACAAGAAAA
GAAATAAAAA AACTTATTAA AAACGGAGAG GTAAAAGTTG ACGGAGTTGT GGTAAAGGAC
AGCGCAATGC AGGTCAATCC CAAGGAAAGT GTCATAGAAG TAGCAGGAGA AATATTGAAA
TATCGTGAAT ATATATATAT AATGATGAAC AAACCTCAGG GAGTCATATC CGCAACTTAT
GACAACAGGC ACAGGACGGT AATTGACATT CTGCCGGATG AATATAAATT TTTTAATCTG
TTTCCGGTGG GAAGGCTGGA TATTGACACC GAGGGTCTTC TTCTTTTGAC CAATGACGGG
CAGCTGGCCC ATGAACTGCT CTCGCCCAGA AAGCATGTGC CCAAAAAGTA TTATGCTCTT
ATTGACGGAA TTGTTACAAC AAAAGATGTC GATGTGTTCC GGGAAGGCGT TGTTCTGGAC
GACGGTTATA AAACTCTTCC TTCCGAGCTT TTTATTTTAA AATCAGGTCC TTATTCCGAG
GTGGAAATAG TAATTTATGA GGGCAAGTTC CACCAAGTCA AGAGGATGTT TGAAGCAGTC
GGGAAAAAAG TTAAATATTT AAGAAGAATC GGTATGGGGA AACTAAAACT GGATGAAACC
CTCGAACCTG GCGACGTGAG AGAGCTTACC GATGAAGAAA TGCTGCTTGT CAAAGAAGTT
GAAAAGGTAA ACTGA
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| Protein sequence | MRDTQRIDKI LSNSGFGTRK EIKKLIKNGE VKVDGVVVKD SAMQVNPKES VIEVAGEILK
YREYIYIMMN KPQGVISATY DNRHRTVIDI LPDEYKFFNL FPVGRLDIDT EGLLLLTNDG
QLAHELLSPR KHVPKKYYAL IDGIVTTKDV DVFREGVVLD DGYKTLPSEL FILKSGPYSE
VEIVIYEGKF HQVKRMFEAV GKKVKYLRRI GMGKLKLDET LEPGDVRELT DEEMLLVKEV
EKVN
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