Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_3081 |
Symbol | |
ID | 4809955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 3636401 |
End bp | 3637243 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640108505 |
Product | transglutaminase-like protein |
Protein accession | YP_001039470 |
Protein GI | 125975560 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAA TAGTAAGCAG TATTACTATG CTCATCTTAA CTATTGCCAT TTTTACAAAT CCGGGATTTG CACAAACTAC CACCGTCACA GAGTACATAA TGTCCAATGG AGTCTCTCTC CAAAAAATCC CGTCAACTGT TGAAGGAAAA ATTACATTAG CCGGTGAAAC TGTTAACAGC TTAATCAAAA TACTTGTCAT CAAGGATGAT ATTCAGCGCT GGTATGAGGT TAAGCTTGTT GACGGCAAAT TTAATGAGGA AATTTGGCTT ATTGACGGAA CAGGCAAATA CCAGGTTTCC GTTTTGGTTC ACAAGAAAGA TAGAATATAT ACCTTCGGAC CGACGGTGTT TGTTGAAAAT GCCGTGGAGG TAAACAGGTT TGCAGTACCC ACACTTCATG TTGAAAGCAA TAATGAAAAA ATAATTGCTT TGGCAAAGGA ATTAACCAAA GACGCCAAAA CTGACAGGGA AAAAGCCCAA AAAATCTATA ATTGGGTTGT CAAAAATATT AAATATGATT ACGATAAATA TTTAAGACAG CTTAATAAGA ACTATGACAA TGCATATGGT GCTCTTAACA CTTTGGAAAC CGGAAAAGGC GTATGCTACG ATTTCTCTGC ACTCGTTGCT GCCTTGGGCA GGGCATCAGG ATTGCAGGTA AAAATGATTA AAGGAAATTT CATTGGGACA TACAGCAACG AATTGCACGC CTGGAATGAA ATATATATCT CCGAAGAAGG CAGATGGATT AATGTTGACT CCACCTTTGG TTCAACTCTT GGAAGAAACT TCTTTGACAA CAGCGATTTT TTCAAGGATC ATCAGAAACT TGAAGAATAT TAA
|
Protein sequence | MKKIVSSITM LILTIAIFTN PGFAQTTTVT EYIMSNGVSL QKIPSTVEGK ITLAGETVNS LIKILVIKDD IQRWYEVKLV DGKFNEEIWL IDGTGKYQVS VLVHKKDRIY TFGPTVFVEN AVEVNRFAVP TLHVESNNEK IIALAKELTK DAKTDREKAQ KIYNWVVKNI KYDYDKYLRQ LNKNYDNAYG ALNTLETGKG VCYDFSALVA ALGRASGLQV KMIKGNFIGT YSNELHAWNE IYISEEGRWI NVDSTFGSTL GRNFFDNSDF FKDHQKLEEY
|
| |