Gene Cthe_3081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3081 
Symbol 
ID4809955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3636401 
End bp3637243 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content37% 
IMG OID640108505 
Producttransglutaminase-like protein 
Protein accessionYP_001039470 
Protein GI125975560 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TAGTAAGCAG TATTACTATG CTCATCTTAA CTATTGCCAT TTTTACAAAT 
CCGGGATTTG CACAAACTAC CACCGTCACA GAGTACATAA TGTCCAATGG AGTCTCTCTC
CAAAAAATCC CGTCAACTGT TGAAGGAAAA ATTACATTAG CCGGTGAAAC TGTTAACAGC
TTAATCAAAA TACTTGTCAT CAAGGATGAT ATTCAGCGCT GGTATGAGGT TAAGCTTGTT
GACGGCAAAT TTAATGAGGA AATTTGGCTT ATTGACGGAA CAGGCAAATA CCAGGTTTCC
GTTTTGGTTC ACAAGAAAGA TAGAATATAT ACCTTCGGAC CGACGGTGTT TGTTGAAAAT
GCCGTGGAGG TAAACAGGTT TGCAGTACCC ACACTTCATG TTGAAAGCAA TAATGAAAAA
ATAATTGCTT TGGCAAAGGA ATTAACCAAA GACGCCAAAA CTGACAGGGA AAAAGCCCAA
AAAATCTATA ATTGGGTTGT CAAAAATATT AAATATGATT ACGATAAATA TTTAAGACAG
CTTAATAAGA ACTATGACAA TGCATATGGT GCTCTTAACA CTTTGGAAAC CGGAAAAGGC
GTATGCTACG ATTTCTCTGC ACTCGTTGCT GCCTTGGGCA GGGCATCAGG ATTGCAGGTA
AAAATGATTA AAGGAAATTT CATTGGGACA TACAGCAACG AATTGCACGC CTGGAATGAA
ATATATATCT CCGAAGAAGG CAGATGGATT AATGTTGACT CCACCTTTGG TTCAACTCTT
GGAAGAAACT TCTTTGACAA CAGCGATTTT TTCAAGGATC ATCAGAAACT TGAAGAATAT
TAA
 
Protein sequence
MKKIVSSITM LILTIAIFTN PGFAQTTTVT EYIMSNGVSL QKIPSTVEGK ITLAGETVNS 
LIKILVIKDD IQRWYEVKLV DGKFNEEIWL IDGTGKYQVS VLVHKKDRIY TFGPTVFVEN
AVEVNRFAVP TLHVESNNEK IIALAKELTK DAKTDREKAQ KIYNWVVKNI KYDYDKYLRQ
LNKNYDNAYG ALNTLETGKG VCYDFSALVA ALGRASGLQV KMIKGNFIGT YSNELHAWNE
IYISEEGRWI NVDSTFGSTL GRNFFDNSDF FKDHQKLEEY